Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sebi27g00095 | ATGGCGCAGAGTAATTGGGAAGCAGATAAGATGCTTGATGTTTATATTTATGATTATTTAGTGAAGAAAAAGTTGCACATCACTGCCAAGTCATTCATGACAGAGGGGAAGGTTTCTCCTGATCCAGTAGCAATTGATGCTCCTGGAGGTTTTCTTTTTGAGTGGTGGTCTGTTTTCTGGGATATTTTTATTGCAAGGACAAATGAGAAACATTCTGAGAATGCTGCAGCATATTTAGAGGCTCAACAGATTAAAGCGAAAGAACAACAGCAATTGCATATGCAGCAGTTGCAGTTAATGCGTCAAGCTCAGCTGCAAAGAAGGGATTCTAATCATACTCCTCTCGGAGGTTCTGTAAATGCTATCACTACAGAAGGAATGCTTGGGCAATCTACTGCCAGTGCTTTGGCTGCAAAAATGTATGAAGAGCGGATGAAGCACTCTAACCCCATGGATACAGAGACATCCCAGCCACTTCTAGATGCTAGAATGGCCCTTTTGAAACCAACAAATCATCCTGGTCAGATGGTTGCAGGAAACTCAGGAAGTGTGACAGCAGCTCTGCAGCAAATCCAGGCTCGAACTCAGCAGACCCCTCAGGACATCAAAGGTGAAGTCAACATGGGCACTATGCAGAGATCTCTGCCTATGGATCCTTCTTCAGTTTATGGGCATGGAGGAATGCAGTCAAAGCCTGGAATCACAAATGCAGGTTTAAATCCTGGAGTTGGTGGTCTCACATTGAAAGGATGGCCTTTAACTGGCATAGATCAAATTCGTCCTGGTTTTGGAGCACAAGTTCAGAAGCCTCTCCTTCAGAGTGCAAATCAATTTCAGCTTTTGCCACAACAACAACAACAGCAGATTCTTGCACAGGTACAAGCACAAGGAAATATTGGCAATTCGCCAGTGTATGGAGATATGGATCCACAGCGATTAAGGGGATTAGCTAGGGGAAATTTGAATGTGAAAGATGGTCAACAAATTGCGAACGATGGATCAATAGGCTCTCCAATGCAATCTACTTCATCTAAGATCAACATGCCACAGATCCAACAATCCACCTCCCAGCAACAACAGGATCCTTTGCATCCACAGCAGCTGGTGCAGAATAACCGAAAAAGGAAAGGGCCTACATCTTCAGGAGCTGCCAATAGTACTGGTACAGGAAATACACTCGGCCCTTCTAATTCTCAACCGTCAACTCCATCTACTCATACTCCTGGTGATGGAGTTGCTATGGCGGGTAACTTGCAGAATGTTTCTGGTGTATCTAAAGGTTTGATGATGTATGGTACTGAAGGAGCAGTTGGTCTTGCATCTTCTACAAACCAACTGGATGACATCGAACATTTTGGAGACGTTGAATCATTTCTCTCACAGGATGATGGTGATGGAAGGGAATTGTTTGCTGTGAAACGGAACCCCTCTGATCATGCTACAGATGCTTCAAAAGGCTTTTCCTTCAGTGAAGTTGGTTCTATACGCAAAAGCAACAGCAAAGTTGTTTGCTGTCATTTCTCTTCAGATGGGAAATTATTAGCTAGTGCTGGACATGACAAGAAGGTTGTTCTGTGGAACATGGACACACTGCAAACAGAGAGCACACCTGAGGAACACAGTCTTATTATTACTGATGTTCGCTTCAGACCAAATTCAACTCAGCTGGCAACGTCTTCATTTGATACAACTGTGCGGCTTTGGGACGCTGCAGATCCAAGCTTTTCTTTGCAGGCGTATAGCGGCCATACTTCACATGTGGTGTCCCTTGATTTCCACCCAAAGAAAAATGATCTTTTCTGTTCCTGTGATGATAACAATGAGATTCGCTTCTGGAATATTAGTCAATATTCTTGCACTCGTGTTTTTAAGGGAGGATCTACACAGGTGAGGTTTCAGCCAAGGACTGGACAACTTCTTGCTGCAGCATCTGGCAGTGTTGTGTCTCTCTTTGATGTTGAGACTGACAGGAAGATGCACACCTTACAGGGACACTCTGCAGAGGTACACTGTGTATGTTGGGATACAAATGGAGAGTACTTGGCATCTGTGAGTCAAGAATCTGTCAAAGTGTGGTCACTTACCTCTGGGGACTGCATTCATGAACTTAATTCCAGTGGAAATATGTTTCATTCTTGTGTTTTTCACCCAAGCTACTCCACTCTATTGGTTATTGGTGGATACCAGGGTCCCATTGGATATGCTGTCTCTTCTGAAGACCATCTGGATGTAAACTTGAACGCTTGTTGGGGGAATACAACACATTTGCTACTTGGGTCAATAGTAGACTTGATTGATATCAAATACCAAAGATTGAGGCCTCTTGGATCAGGAAGCATGTATCAAGCAGCATTGTCAGACCATTCTGTCTGA | 2373 | 0.4378 | MAQSNWEADKMLDVYIYDYLVKKKLHITAKSFMTEGKVSPDPVAIDAPGGFLFEWWSVFWDIFIARTNEKHSENAAAYLEAQQIKAKEQQQLHMQQLQLMRQAQLQRRDSNHTPLGGSVNAITTEGMLGQSTASALAAKMYEERMKHSNPMDTETSQPLLDARMALLKPTNHPGQMVAGNSGSVTAALQQIQARTQQTPQDIKGEVNMGTMQRSLPMDPSSVYGHGGMQSKPGITNAGLNPGVGGLTLKGWPLTGIDQIRPGFGAQVQKPLLQSANQFQLLPQQQQQQILAQVQAQGNIGNSPVYGDMDPQRLRGLARGNLNVKDGQQIANDGSIGSPMQSTSSKINMPQIQQSTSQQQQDPLHPQQLVQNNRKRKGPTSSGAANSTGTGNTLGPSNSQPSTPSTHTPGDGVAMAGNLQNVSGVSKGLMMYGTEGAVGLASSTNQLDDIEHFGDVESFLSQDDGDGRELFAVKRNPSDHATDASKGFSFSEVGSIRKSNSKVVCCHFSSDGKLLASAGHDKKVVLWNMDTLQTESTPEEHSLIITDVRFRPNSTQLATSSFDTTVRLWDAADPSFSLQAYSGHTSHVVSLDFHPKKNDLFCSCDDNNEIRFWNISQYSCTRVFKGGSTQVRFQPRTGQLLAAASGSVVSLFDVETDRKMHTLQGHSAEVHCVCWDTNGEYLASVSQESVKVWSLTSGDCIHELNSSGNMFHSCVFHPSYSTLLVIGGYQGPIGYAVSSEDHLDVNLNACWGNTTHLLLGSIVDLIDIKYQRLRPLGSGSMYQAALSDHSV | 790 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sebi27g00095 | 790 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 537 | 569 | IPR001680 | GO:0005515 | |
Sebi27g00095 | 790 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 495 | 536 | IPR001680 | GO:0005515 | |
Sebi27g00095 | 790 | MobiDBLite | consensus disorder prediction | 326 | 408 | - | - | |
Sebi27g00095 | 790 | SUPERFAMILY | WD40 repeat-like | 489 | 730 | IPR036322 | GO:0005515 | |
Sebi27g00095 | 790 | ProSitePatterns | Trp-Asp (WD) repeats signature. | 514 | 528 | IPR019775 | - | |
Sebi27g00095 | 790 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 580 | 615 | - | - | |
Sebi27g00095 | 790 | CDD | WD40 | 491 | 727 | - | - | |
Sebi27g00095 | 790 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 537 | 569 | - | - | |
Sebi27g00095 | 790 | PANTHER | TRANSCRIPTIONAL REGULATOR OF FILAMENTOUS GROWTH FLO8 | 1 | 729 | IPR044716 | GO:0003714 | |
Sebi27g00095 | 790 | Gene3D | - | 630 | 741 | IPR015943 | GO:0005515 | |
Sebi27g00095 | 790 | MobiDBLite | consensus disorder prediction | 326 | 417 | - | - | |
Sebi27g00095 | 790 | Pfam | LisH | 10 | 36 | IPR006594 | GO:0005515 | |
Sebi27g00095 | 790 | SMART | WD40_4 | 616 | 652 | IPR001680 | GO:0005515 | |
Sebi27g00095 | 790 | SMART | WD40_4 | 530 | 569 | IPR001680 | GO:0005515 | |
Sebi27g00095 | 790 | SMART | WD40_4 | 573 | 613 | IPR001680 | GO:0005515 | |
Sebi27g00095 | 790 | SMART | WD40_4 | 655 | 693 | IPR001680 | GO:0005515 | |
Sebi27g00095 | 790 | SMART | WD40_4 | 488 | 527 | IPR001680 | GO:0005515 | |
Sebi27g00095 | 790 | Gene3D | - | 459 | 629 | IPR015943 | GO:0005515 | |
Sebi27g00095 | 790 | ProSiteProfiles | LIS1 homology (LisH) motif profile. | 8 | 40 | IPR006594 | GO:0005515 | |
Sebi27g00095 | 790 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 495 | 530 | - | - | |
Sebi27g00095 | 790 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 662 | 702 | IPR001680 | GO:0005515 | |
Sebi27g00095 | 790 | Pfam | WD domain, G-beta repeat | 577 | 613 | IPR001680 | GO:0005515 | |
Sebi27g00095 | 790 | Pfam | WD domain, G-beta repeat | 500 | 527 | IPR001680 | GO:0005515 | |
Sebi27g00095 | 790 | Pfam | WD domain, G-beta repeat | 536 | 569 | IPR001680 | GO:0005515 | |
Sebi27g00095 | 790 | Pfam | WD domain, G-beta repeat | 658 | 693 | IPR001680 | GO:0005515 | |
Sebi27g00095 | 790 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 580 | 622 | IPR001680 | GO:0005515 | |
Sebi27g00095 | 790 | SMART | Lish | 8 | 40 | IPR006594 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sebi27g00095 | Sebi-Chr27 | 1896517 | 1909839 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sebi27g00095 | 489 | 694 | U-box Gene Family | AT2G33340 | 28.241 | 7.66e-16 | 79.3 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | LUG | Sebi27g00095 | WD40 | 5.8e-06 | CL0186 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sebi27g00095 | - | - | gmx:100797756 | 1289.63 |