Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi27g00091 ATGGCGAAGGGTGACGACTCTCTGAGAAGAAAGAAGAACAAAAAGCTTAGAAAAAAGAACAATGACACTTCCTCTCTCTCTGCAAAGGTTGCATCCATTATCGCCGCCAAGAAGCGCCGCAAGGCCGGAAAACGACGCATGTGTCAGGGGATGTGCTTTAGTCTACCTACTCCAGATGATCCATTCAATGATAGACACGAGCAACCGGAACTGAAAACGAAGGGTCCTAAAAAGAAAACACATTCCCGAAAAGATGAGACAGTTCCTCCTAATGGGAAGAGTGCACATGGAAGGAAAGACGCAGTTAGTGGGAATATTTCACAGAAATTAAAGGAACAAACAGGGAAGGAGCCTGTCACTGCTAACAATAATCTGGGCCAGAAATGTATTATTAACTCAGAAAGGAAAAGTATTGAGTTGACTCAGATGGCTGACCTTCCCGGTGCTCAACAGCATGATTGTGAAATTCCAGAATTCCCTTCCAAGTTTGTGTTTTGGTGTCTAAGTGCAATTGAAAATGCACTGCGACATGGTGATGCCTACACTGATGGGGAGGGTAACTCTTTCTTTCTTAACTCTTGGGGGTTAGAATTTTCAAAGTGTTATTCTACTGGGAAAGATCTGATAGAGACCAGTGGAACCTATGCTACTACTGAGCAAATTGCATGGGTGGTTTCTGCGGCAGCTGATACTTTTGTGAGAAAAGAGAAACAAGGTTTATCATTTGCCTGTCCCTTTCTCCTGTTCCTTGTACCTTCCCAAGAAAAAGCTGCCCAGGTTCGAACAGTTTGCAAGCCCTTAAAATCTCTCGGAATACATACAGTGAGTATTCATCCAGGTGCTTCCTTAGATCATCAGATTCAAGGTCTGAAAAGTTGTGAGCCTGAGTTTCTTGTTTCTACTCCCGAGAGGCTTTTGGAGCTTGTGTCAATGAAGGCCATTGATATTTCTGGTGTCTCCATGCTGGTTATTGATGGGCTTAATACTATTTGTAGTACTAGCCACTCTGATACAATAAAATCCATCAAGAAGCTTATTTCTGGCAATCCCCGTCTTGTGGTTTTCAATGATAGCTTGAACCATACATCTATCCCAATGGTTCGGTATCTTCTCACAGGATCTATTTGTAGACTATCTCTGAATGATTCGGTTGCTAGCCAAAGTTCATGCATTATCCAGTCTGTTAAAGTGTGTGCATCAGAAGAAGATAAACTTGTTAAGAGCATCGAAGTCCTGGATCAATTTAGGAGAAGCCACAGTCATAATTCAAACCTGCTATATATTTTGAGGAAAGATGTCAAATGCCATAAATTGGTCAAGACTCTCAAATCCAAGGGTTGTTCTGCTTCACTTGATTCTGATGCAGAAAATTTTAATGATAGTGTGGATTTAAAAAGCAGATTACGACCGGTGGTTCCCATGATTGATTTGGAGCAAATCTTTACTGCGGATATAGGGACCTATGATGTAATAGTCCTTCCTAATTTTGTACCCTCTATGGACACTTATGTGCATATTTTGACAAAGATGGCCCGCCAAAGTGTCAATGGTGTTTTGCATTGTTTCTTAACAAAAGAAGATACAGAACTTGCTGGACCACTCATCTCAATTCTTGAACAATGTGGGCAGGAAGTGCCTCAGACCCTACGAGATATGCATCATACATCAAACATGTTGGAAGATTGA 1686 0.4158 MAKGDDSLRRKKNKKLRKKNNDTSSLSAKVASIIAAKKRRKAGKRRMCQGMCFSLPTPDDPFNDRHEQPELKTKGPKKKTHSRKDETVPPNGKSAHGRKDAVSGNISQKLKEQTGKEPVTANNNLGQKCIINSERKSIELTQMADLPGAQQHDCEIPEFPSKFVFWCLSAIENALRHGDAYTDGEGNSFFLNSWGLEFSKCYSTGKDLIETSGTYATTEQIAWVVSAAADTFVRKEKQGLSFACPFLLFLVPSQEKAAQVRTVCKPLKSLGIHTVSIHPGASLDHQIQGLKSCEPEFLVSTPERLLELVSMKAIDISGVSMLVIDGLNTICSTSHSDTIKSIKKLISGNPRLVVFNDSLNHTSIPMVRYLLTGSICRLSLNDSVASQSSCIIQSVKVCASEEDKLVKSIEVLDQFRRSHSHNSNLLYILRKDVKCHKLVKTLKSKGCSASLDSDAENFNDSVDLKSRLRPVVPMIDLEQIFTADIGTYDVIVLPNFVPSMDTYVHILTKMARQSVNGVLHCFLTKEDTELAGPLISILEQCGQEVPQTLRDMHHTSNMLED 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi27g00091 561 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 241 369 IPR027417 -
Sebi27g00091 561 Pfam DEAD/DEAH box helicase 218 346 IPR011545 GO:0003676|GO:0005524
Sebi27g00091 561 MobiDBLite consensus disorder prediction 60 93 - -
Sebi27g00091 561 Gene3D - 236 382 IPR027417 -
Sebi27g00091 561 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 11 534 - -
Sebi27g00091 561 Gene3D - 483 557 IPR027417 -
Sebi27g00091 561 MobiDBLite consensus disorder prediction 1 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi27g00091 Sebi-Chr27 1815012 1827392 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi27g00091 248 552 Eukaryotic Initiation Factors Gene Family AT1G72730 20.833 2.05e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi27g00091 - - gmx:100809099 823.542