Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi27g00075 ATGCCATATTTGATTGATGTGGCAGCAGAAGTGACTGGAGAAGATATTGTGAGGTCAATGAGTGATGGAAGAAGGAGTTTTGGGGAGTGGTCCTCAGCAAGCTTGCATGATGCAGTTGGTGGACAGGGTGATGTGTTTCAAAGAAGTGGAAGGGAAATAGATGAAGAGGAGGAGCTGAAGTGGGAAGCTTTGGGGAGGCTTCCAACATATGATAGGTTGAGGAAAGGGATTCTGAAGCAAGTTCTAGAAAATGGGAGGGTTAACTATGAAGAGATTGACATCACCAAGCTTGGAGTGCAGGAAAAGAAGTATATCCTTGAGAGCATACTGAAGACTGCTGAAGAAGATAATGAGAAATTTCTTCATAGGATGAGGGACAGAATTGATAGGGTTGGAATTGAGATTCCCAAGATTGAAGTCAGGTTTGAGCATTTATCAGTTGAAGGAGATGCATATATTGGAACTAGGGCCTTACCAGCACTACTTAATACTACCATGAATGTAGTAGAGGGACTTCTTGGATATATCAAGCTTTTGCCATTTAAGAAAAGGGTTGTCAAGATTCTCAAAGATGTCAGTGGAATTGTGAAACCATCAAGGATCAGGAAAAACTACACTCCTCCAGGCACTTGCTGGAAAAATGGACAAGGATCTAAGGAATTGTCAAGAAGAGAACTAGTAGCAGATATCAAACCAGATCCTGAAATTGATGCTTTCATGAAAGCCACAGCAGTGGAAGGTCAAGAAACAAGTCTTGTTACAGATTATATTCTCAAGATTCTTGGATTGGAAATATGTGCTGATATTTTGGTGGGAGATGAAATGAGAAGGGGCATATCTGGTGGACAAAAGAAGCGTTCAACTACTGAATCATTCATTTTGTCAGCTCTAATAAACAGTAACTTATGTAAACTGAATGGTGCAGGTGAGATGTTGGTAGGACCTGCAAAAGCCTTCTTCATGGATGAAATTTCAACTGGTTTGGATAGTTCCACTACCTTCCAAATCATCAGGTTTATGAGACAGATGGTCCATATCATGGATGTTACTATGATAATCTCTCTTCTGCAACCTGCACCAGAAACATATGACCTTTTTGATGACATAATATTACTTTCTGATGGCTTCAAATGCCCAGAAAGGAAAGGAGTTGCAGACTTTTTACAGGAGGTAACTTCCAGAAAGGACCAAGAACAATACTGGTTCAGAAGGGACTTACCTTACCAATATATTAGTGTGCCTGAGTTTGTAGCACACTTCAACAATTACTGCATTGGCCAACAACTTCATGAAGAGATTCAAGTTCCATTTGATTCTAATAAAACTCACCCTGCTGCATTGGTCAAGGAAAAAACAGAAATGAAGCATGGTCATCTTGAAGATGGAGGAAAATATTATGGTGCGCCGTTTTTCAGTCTCATCAATGTAATGTTCAATGGAGTGGCAGAGCTTGCAATGACTATTGATAGACTTCCTGTTTTCTTCAAGCAAAGAGATTTCCTGTTTTATCCATCATGGGCTTCTGCATTGCCCATCTGGGTCCTTAGAATTCCTCTCTCTCTATTGGAGTCAGGAATATGGATCATCCTTACCTATTATACTATTGGCTTTGCTCCTTCAGCTAGTAGGTTTTTTCGTCAATTATTGGCATTCTTCTGTGTGCATCAAATGGCTCTATCCCTTTTCCGCTTCATTGCTGCAATTGGAAGAACAAAAGTTGTGGCAAACACACTTGGTATCTTCACGATTTTAGTTGTTATGATATGGTGCTATTATGCTTCACCTATGATGTATGGACAGACTGCAATAGCCATCAATGAGTTCCTAGACAAAAGATGGAGTGCTCCTAATAATGACCCAAGAATTCCTGAGCCCACAGTTGGGAAGGCTTTTCTTAAGGCCAGAGGCATATTTACAAAAGACTATTGGTACTGGATATCTGTTGGTGCCCTTATAGGATTTTCTCTTCTTTTCAACATTTGTTTCGTTCTTGCTCTAACTTATTTAAATCCATTTGTAAGTTCAAAATCTATTATAGTGGAAGAGGAAGACAGTAGGAAAAGCATGACTGCATCTTCCTCAGGGAAAGAACTGGCAACAGCAAATTCAGAGAAGAATTCAGCTTCAAATGCTAAATGGTTTGAAGGTATTGATCTGGAAGTAAGAAACACCACACATAGCCCAATTACAAAAGCTGCAGAGTTTTCAAAGTCCAAGAAGGGAATGGTGTTGCCCTTTCAGCCTCTGTCACTTGCTTTTGAAAATGTGAATTATTACATCGATATGCCAAATGAAATGAAGAAACAAGGAATTGAAGAGAATAGACTCCAACTACTAAAAGATATAAGTGGTGCTTTCAGGCCTGGAGTATTAACAGCATTAGTTGGTGTAAGTGGTGCTGGAAAAACCACCTTGATGGATGTGCTTGCAGGAAGGAAAACTGGTGGTTATATTGAGGGAAGCATCAACATATCCGGTTATCCAAAGAACCAATCAACTTTTGCTCGGATTAGTGGTTATTGTGAACAAAATGATATCCATTCTCCAAATGTTACAGTCTATGAATCCCTTCTGTTTTCTGCTTGGTTGCGTCTCAGTAAGGAGGTTGATAAAGAAACACGAAAGATGTTTATTGAGGAAGTTATAGAGCTGGTTGAGCTACATTCAGTGAGGAATTTTATAGTAGGCCTTCCAGGAATAGACGGCTTATCAACTGAACAGAGAAAGAGGCTTACCATCGCTGTAGAGTTGGTTGCAAATCCTTCCATTATCTTTATGGATGAGCCAACAACTGGTCTTGATGCTAGAGCTGCAACAGTTGTTATGCGTACTGTTAGAAATACAGTAGATACAGGGAGAACTGTTGTCTGCACAATTCATCAACCAAGCATTGATATATTTGAACATTTTGATGAGCTGCTTTTGATGAAGAGAGGTGGACAAGTGATATATGGTGGTCCTCTTGGTCGAAATTCTGAGAAGCTTATAGGGTACTTTGAGGCTATTACAGGAATTCCTGAGATTAAAGATGGATATAATCCAGCCACATGGATGCTGGAGATCACTTCTCCCTTAGTTGAATCTCAGCTTGATATAGACTTTGCTGAATTATACACAAAGTCAGACCTTTACCAAAAGAACCAGGAACTTATTAAGGAACTATGCACACCAGTACCTGGGACAAAAGACCTTTACTTTCCATCTAAATACTCCCAATCCTTTGTTACTCAATGCAAAGCTTGCTTCTGGAAACAGTACTGCTCCTATTGGAGGAATCCACAGTATAATGCCGTCAGATTATTCATCACTATAATTATTGGCATCATTTTTGGACTTATTTATTGGAATAAAGGAGATAAAACGCAAAAGGAACAAGACCTGTTGAATCTCCTTGGAGCTATGTATTTATCTGTTATTTTCCTTGGAGCCTCCAACACTAGCAGTGTGCAACCTGTTGTTGCAATAGAAAGAACAGTTCTCTACCGTGAAAGAGCTGCTGGAATGTACTCAGAACTGCCCTATGCAATTGGTCAGGTAGCAATTGAAGTAATTTATGTTGCAATCCAAAGTCTAGCCTATTCCATTATCCTCTACTGGATGATTGGGTTGCCATCACAAGTTGATAATTTCTTGTGGTTCTACTACTTCATATTCATGTCCTTCATGTACTTCACACTGTATGGAATGATGACTGTAGCTCTGACACCAAACCACCAAATTGCTGCAATTGTTATGTCTTTCTTCATCAGTTTCTGGAACCTGTTCTCTGGTTTTCTTATCCCAAGAACGCAAATTCCAATATGGTGGAGGTGGTACTATTGGGCATCCCCTGTGGCATGGACTATATATGGATTGGTGACATCACAGGTGGGTGACAAGAACAGTCCAATAGAAGTTCCTGGGTTTAAGCCAATGACAATAAAAGAGTACCTTGAGAAACGGTTGGGCTTTCAACATGACTTCCTTGGGGTTGTTGCTTTGACTCACATTGCTTTCAGCCTTCTCTTCCTTTTTGTATTTGCTTATGGCATCAGATACAGAGACTCTTTGTTAGAGAGGAACTCTTTGTTCACCAATCTCAAATTAAAACCCAAGGGTTTCGCAGCCTTACTGAAGGAGAGAGTCCGTTATCTCATCGACTCTGACCCTGACGGCCGCTCCAAAGCCGTCGATGTCACCGGTCATGATGGTGTTGATGTCCAGGGAAGCCAATGCGGTGGTGGTGGATTTGGCAGTGGAGGCAGATACGGCGGTGGAGGCGGATATGGTGGTGGAAGCATAACGAAGGGGAGAGCTATGGCAGAAGGAGAAAATTAG 4317 0.4063 MPYLIDVAAEVTGEDIVRSMSDGRRSFGEWSSASLHDAVGGQGDVFQRSGREIDEEEELKWEALGRLPTYDRLRKGILKQVLENGRVNYEEIDITKLGVQEKKYILESILKTAEEDNEKFLHRMRDRIDRVGIEIPKIEVRFEHLSVEGDAYIGTRALPALLNTTMNVVEGLLGYIKLLPFKKRVVKILKDVSGIVKPSRIRKNYTPPGTCWKNGQGSKELSRRELVADIKPDPEIDAFMKATAVEGQETSLVTDYILKILGLEICADILVGDEMRRGISGGQKKRSTTESFILSALINSNLCKLNGAGEMLVGPAKAFFMDEISTGLDSSTTFQIIRFMRQMVHIMDVTMIISLLQPAPETYDLFDDIILLSDGFKCPERKGVADFLQEVTSRKDQEQYWFRRDLPYQYISVPEFVAHFNNYCIGQQLHEEIQVPFDSNKTHPAALVKEKTEMKHGHLEDGGKYYGAPFFSLINVMFNGVAELAMTIDRLPVFFKQRDFLFYPSWASALPIWVLRIPLSLLESGIWIILTYYTIGFAPSASRFFRQLLAFFCVHQMALSLFRFIAAIGRTKVVANTLGIFTILVVMIWCYYASPMMYGQTAIAINEFLDKRWSAPNNDPRIPEPTVGKAFLKARGIFTKDYWYWISVGALIGFSLLFNICFVLALTYLNPFVSSKSIIVEEEDSRKSMTASSSGKELATANSEKNSASNAKWFEGIDLEVRNTTHSPITKAAEFSKSKKGMVLPFQPLSLAFENVNYYIDMPNEMKKQGIEENRLQLLKDISGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSINISGYPKNQSTFARISGYCEQNDIHSPNVTVYESLLFSAWLRLSKEVDKETRKMFIEEVIELVELHSVRNFIVGLPGIDGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAATVVMRTVRNTVDTGRTVVCTIHQPSIDIFEHFDELLLMKRGGQVIYGGPLGRNSEKLIGYFEAITGIPEIKDGYNPATWMLEITSPLVESQLDIDFAELYTKSDLYQKNQELIKELCTPVPGTKDLYFPSKYSQSFVTQCKACFWKQYCSYWRNPQYNAVRLFITIIIGIIFGLIYWNKGDKTQKEQDLLNLLGAMYLSVIFLGASNTSSVQPVVAIERTVLYRERAAGMYSELPYAIGQVAIEVIYVAIQSLAYSIILYWMIGLPSQVDNFLWFYYFIFMSFMYFTLYGMMTVALTPNHQIAAIVMSFFISFWNLFSGFLIPRTQIPIWWRWYYWASPVAWTIYGLVTSQVGDKNSPIEVPGFKPMTIKEYLEKRLGFQHDFLGVVALTHIAFSLLFLFVFAYGIRYRDSLLERNSLFTNLKLKPKGFAALLKERVRYLIDSDPDGRSKAVDVTGHDGVDVQGSQCGGGGFGSGGRYGGGGGYGGGSITKGRAMAEGEN 1438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi27g00075 1438 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 774 987 IPR027417 -
Sebi27g00075 1438 Pfam ABC transporter 779 930 IPR003439 GO:0005524
Sebi27g00075 1438 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 219 451 - -
Sebi27g00075 1438 SMART AAA_5 788 980 IPR003593 GO:0016887
Sebi27g00075 1438 Pfam ABC-transporter N-terminal 113 163 IPR029481 -
Sebi27g00075 1438 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 751 1003 IPR003439 GO:0005524
Sebi27g00075 1438 Pfam Plant PDR ABC transporter associated 613 679 IPR013581 -
Sebi27g00075 1438 Pfam ABC-2 type transporter 465 593 IPR013525 GO:0016020|GO:0140359
Sebi27g00075 1438 Pfam ABC-2 type transporter 1076 1288 IPR013525 GO:0016020|GO:0140359
Sebi27g00075 1438 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 253 376 IPR027417 -
Sebi27g00075 1438 FunFam ABC transporter G family member 40 765 995 - -
Sebi27g00075 1438 Pfam ABC-2 type transporter 960 1030 IPR043926 GO:0140359
Sebi27g00075 1438 Gene3D - 760 996 IPR027417 -
Sebi27g00075 1438 Gene3D - 214 396 IPR027417 -
Sebi27g00075 1438 CDD ABCG_PDR_domain2 748 986 IPR034003 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi27g00075 Sebi-Chr27 1528698 1540544 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi27g00075 776 963 Calmodulin-binding Proteins AT2G36910 27.228 2.95e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi27g00075 K08711 - gmx:100788067 1898.63