Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi27g00064 ATGGACGGTTTTGAAGAAGGCCCACTTGGCGGCCCACTGGTCCAACTCGATTGGGAAGCTTTCTTCGACAAGTTACCAGAATTCGAAGTCGATGATATTTTGCTGGAGGATGAGTCTCCTGTTGCAGTCGCCGATGGTCCCTCGCCGGATCCCATTCTATCGGAAATCGAGAACTTGCTTATGGCCGACACCGACGCCGGCAACGGCGAAGTCCTTCCCGGAACGCCTTCGTCGGAGTCCGACTACGACAAGCTTCTGGCGGAGATACTCGTCGAGCCGCGCCCTGATTCTGAGGAAGGTTCGGTTCCTTCTGACAAAGAGAGAGTCGATCCAGTAACTCCCGAAGAGGCTGCTGATGAACCTATGTCCAAGAAGATAAAAAGGCAGATGAGAAACAGGGATGCTGCTGTGAGATCCAGGGAGAGGAAGAAGATGTATGTGAAAAACCTTGAGATGAAGAGTAGGTATTATGAAGGGGAATGCAAAAGACTGGCGCATTTGCTCCAGTGTTGCTATGCTGAGAACCACGCTTTGCGGCTTTGTTTGCAATCGCGTGGTGCATTTGGTGCTCCCGTGACCATGCAGGAGTCTGCTGTGCTCTTGTTGGGAAAGGGAGTTATGGAGGGGAAGGGCAGGGTTGTTGGAAGTTGGAACCCCGTACCCGTGTTTGGGAATGTCTGA 681 0.5242 MDGFEEGPLGGPLVQLDWEAFFDKLPEFEVDDILLEDESPVAVADGPSPDPILSEIENLLMADTDAGNGEVLPGTPSSESDYDKLLAEILVEPRPDSEEGSVPSDKERVDPVTPEEAADEPMSKKIKRQMRNRDAAVRSRERKKMYVKNLEMKSRYYEGECKRLAHLLQCCYAENHALRLCLQSRGAFGAPVTMQESAVLLLGKGVMEGKGRVVGSWNPVPVFGNV 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi27g00064 226 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 127 142 IPR004827 GO:0003700|GO:0006355
Sebi27g00064 226 CDD bZIP_HY5-like 125 176 - -
Sebi27g00064 226 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 15 203 - -
Sebi27g00064 226 Pfam bZIP transcription factor 123 168 IPR004827 GO:0003700|GO:0006355
Sebi27g00064 226 Gene3D - 123 184 - -
Sebi27g00064 226 SMART brlzneu 120 184 IPR004827 GO:0003700|GO:0006355
Sebi27g00064 226 SUPERFAMILY Leucine zipper domain 124 180 IPR046347 GO:0003700|GO:0006355
Sebi27g00064 226 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 122 164 IPR004827 GO:0003700|GO:0006355
Sebi27g00064 226 MobiDBLite consensus disorder prediction 92 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi27g00064 Sebi-Chr27 1243239 1245710 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi27g00064 48 199 bZIP Transcription Factor Family AT1G42990 34.054 3.39e-17 76.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sebi27g00064 bZIP_1 1.2e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi27g00064 - - ahf:112743660 236.113