Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi27g00037 ATGAAGCATTCGGTGGAAGAAGAAAGAAGGAGTGGAAAGCGAATTGAAACTGATGTGGTGAAGTGGTTGGAGGAGGTGAATGAGGTAATTGAAAAGGCAAATCAGCTCCAGGAAGATCCTCATCGAGCAAAGGTTGGGTGCTCTCGATGGTCTTTCCCTAATTTGATTTTACGACATCAGCTTAGTAGGAGAGCCACAAAGATTGCAAAAGTTGTTGTTCAAGTACAAGGGAAAGGGAAGTTCGATAGAGTTGGTTACCTTCCTCCTCTAGATGGAGCAGCCTCTTCTTCTGGCACAAGAGGTGATGAAAACCTGCTTGAGACAAGAGAGACATTTAAGGAGGAGATTGTGGAGGCTCTAAAAAACCCTAAAGCACGGAACATTGGGATCTATGGGCTTGGCGGTGTGGGCAAAACTGATCTTGTGAAGAAAGTTTTTCAAATAGCTAAGCAGGAAAAATTGTTCGATGCAGTGGTTATGGCTAATGTATCCAAAACTCCTGATATTAAAAGAACCCAAGGAGAGATTGCGGATCTATTGGGTCTGCGATTTAGTGAGAAGACAGTTGCTGGTAGAGCATACAAGCTAAAGCAGAGAATTAAAGAAGAGAAAACTATCCTTGTGATTCTAGATGATATCTGGACCAGACTTGATTTGGAGAAAGTAGGAATTCCATCTGGAAAAGACCATGATGGTTGCAAATTACTCATGACTTCCAGAAACAAAGAGGTGCTGCTGGAAATGGACACTCTCAAGGATTTCACTTTCAGGCTTGAACTTTTGAGTGAAGCAGAAACATGGCGCTTGTTTCAATTTATGGCTGGGGATGTGGTTAATGACATGAGTTTACAAAATGTAGCAACTCAAGTGGCCCAAAAATGTGCAGGTTTGCCTCTTCGCCTAGTGACCGTAGCACGTGCATTGAAAGGTAGAGATATTTATGCTTGGAAAGATGCATTAATGCAATTACAAAGTGTTGATCATGAGGGGATGGATGCGATCACTTATTCTACCCTGGAGTTGAGTTATAACTCGTTGGAGAGTGATGAAATGAAGTCAGTCTTCTTGCTTTCTGCGGTACTAGAAGAAGGTGCACTACATGTGGAGTACTTATTGATAGTTGCAATGGGTTTGGGCATATTTAAGCATATAAATACTGTGGATGATGCAAGAAACAGACTTTACAAAATAATTGGATCTTTGAAGGCATCTTGCCTGTTGCTTGAAGGTAACACAAGTGGGCAGATCCAAATGCATGAAATTGTTCGTGAAGTAGCAGTGTCCATAGCATCAAGGGATCAACATGTATTTGTGATGAAAGAGAGAGATGAGTTGAAGGAATGGCCAAAAGAGGATTTTCTAAAATGGTGCCGACAGATCATACTAGATTGGTGTCATATCCATGAGCTTCCTCCAAGGAAATCTCCAATGGTCAAATTGCCAAGCGAAATAGGGAGATTGACTAATCTAAGAATGCTTGATTTGAGATATTCTGGAATTGAAGTCATCCCACCCAACATCATATCAAGCTTGACTAAATTGGAGGAGTTATACATGGGTGATACCTCCATTAAGTGGGAGACTGAGAATTCAGATAAGCAAAGTGAAAATGCTAGCCTTGCTGAGCTTCGACAATTGTCTAACTTGACAGTCCTAGAATTACAAATTCATGAGGCTTGGATTTTGCCAAGGGACTTGAAATTGATGTTTGAGAAGCTGCAAAGATATAAAATAGTTATAGGAGATGTATGGGAATGGTCTGACATTGAGGATGGAACCTTAAAAACATTGAAGCTCAAACTTGGTACCAATATACATTTGGAGCACGGGATTAAAGCATTGATTAAAGGAGTTGAGAATTTATACTTGGATGAAGTAGATGGCATTCGAAATGTGCTTTATCAACTGAACGGGGAAGGATTTCCATTGTTGAAGCATCTCCACATCCAAAATAATACAAAAATGAAGCACATTGTTGACTCTATGGAGAGGAATCAAGTCCAAGTTTCCTTTCTCAACTTGGAAAAACTAGTACTTAACAATCTTAAAAACTTGGAGAAGATATGTCATGGCCCACTTGCAGTTAATTCTTTTGGCAAGCTTAGTGTTATCAAAGTCCAAAATTGTTTCCAATTAAAATATCTTCTCTCTTTTTCAATGATTAAAGGACTTTCCCAACTTTCTGAGATCGAAGTTTGTCAATGCAATTCTATGGAGAAGCTAGTGCTTGGAGATGTCAATTTGAGTGTTGATAATGACAGATCTATTCAAAAGATTGAGTTTTTAGCATTACGTTCTTTGACTTTACAACATTTGCAGGCACTTGATAATTTCTTTTCTTCTGAGTTGACATCTTCCATAACTGAGCGAAAGCATCAAAGAGGGGAGGCGAGTGTTCCTGCTCCGTTTTTCAGTTTTCAGGTTGCTTTTCCTAATTTGGATACCCTTAAGTTGAGCTCACTCAATTTGAACAAAATTTGGGATGATAATCAGCATTCTATGTACAAATTGACAAGTTTGACTGTGGAGAATTGTGGTGGGTTAAAGTACTTATTCTCGTCTACAATGGTTGGAAGTTTTATGAACCTCAAGCGACTTGAAATTAGTAAATGTCCTTTAATGAATGAGATAATAGCAATAGAAGAGAGAAACTATGGTACTAGTGCATTGAAAAAGGTTCGATTCTCCAAATTGGAATCAATCATATTGAAGGACATGGAAAACTTGAAGACAGTGTGGCACAACCAATTTGATAAATTGAAGCCGTTGCAAGTAATAAATTGTGAGAAAATTGTAGTGGTTTTTCCTTCTTCAGTGCAGAAGACATATAATAATCTAGAGATGTTAGAGGTTATAGATTGTGCTTTAGTGGAAGACATATTCGAATTGAGTTCCAATGAAAAGAGAAGTATGGAGGATGAAACACTCTTGAAAGAAATTACTTTAAGTGGATTGCCAAAGCTAAAAAAGACATGGAGTAGGGATCCTCAAGGAATTCTTAGTTTTCATAATCTAGAAAATGTTGATGTAAGAAGTTGTGGAAGTTTGGAATATCTATTTCCACTTTCTGTAGCCGCTTACTGCTCACATCTCAAAGAACTTTCGATAACATGGTGTGGGAACATGAAGGAAATTGTTGCAGAAAAGAAAGGATCCGTGTGCACAGCTGCCATATTTGAGTTTAATCAACTAAGTACTCTACTACTTTGGAACTTACATAAACTCAAGGGTTTCTATGCAGGAAATCATACTTTGGCATGTCCGTCTTTGAGAACAATAGATGTTTCAAATTGTGCAAAATTGAATCTATTCAAAACTTTATCTACAAGCAGCCTTGGAAGGTTTCGAAATGACAAACTCCATGTTCCAGTGGAACAACCACTTTTCATAGTCGAAGAGGTGATTCCCAACTTGGAGAGGTTAACAATAAATCATAGGGATGCTGACATGATATTGCAAGCCAAAAATTTAGGTGCTCTTTTTACCAAAATTACATTTCTTGGGCTGTCCTATTTTGAGAATACAGAGGCTACATTTCCTTATTGGTTTCTCCAAAATGTCCATACTCTTAAGTGGCTATATATTGAATGGAGTTCCTTCAAGAAGATATTCCAAGATGAAAGACTATCATATGACATATTTGGAGATAACAAATTGCAATGGGCTGATAAACTTAATTACTTCTCCTACGGCGAGAAGTCTGTGCAAGCTCGAAACAATGAGGGTGAAAAGTTGCTCAACAAATTTTGCTCCAGTAAGTGCTTCTTGAAATTTCCATTGTTAGAGGAAGTAGTTGTGAGGGAATGTCCCCGCCTGAAGATTTTCTCTGAGGGAAACCTATGGGCACCAAATCTTCGAAAAGTGAAAACAGCAGAAAATGATGAAGAATGGCATTGGAATGGAAACCTAAATGGTACAATAAAGAATATGTTTGAAGATAAGATAGCATTTTGTAATTTCAAACGTTTAAGCCTATCTGAATATCCCGAGCTGAAAGAATTATGGTATGGCCAACTTCAGCATAATGTATTCAGGACGTTGAAGTACCTAGTGGTTCATAAATGTGATTTTTTATCTGACATACTCTTTCAAGCAAATTTACAAGAAGTGCTTATGAACTTGGAAGAACTAGATGTGACAGATTGCAATTCATTAGAAGCTGTGTTTGATGTGAAAGGTAAATTTACTACAGAAATTCTAGTGAAGAATTGTACTCAGTTAAAAAAGTTAACATTATCCAGTCTTCCAAAACTAAAGCATGTTTGGAAGGAAGATCCTCACGGAACTTTGAGCTTTCAGAATTTATGTGAAGTGTCTGTTGTGAAATGCAAAAGCTTGATAAGTCTCTTTCCACTCTCAGTAGCTAGAGATATCATACAACTTCAAAATCTTCAAGTATGTGAATGTGGGATTGAAGAAATTGTTGCCAAGGAAGAAGAAACAAAGGGGATAATTAAATTTGTGTTTCCTCATTTATTGTCACTTGATCTTATGCATTTGCCTAAACTCAAGTCGTTCTTTTGTGGGATCCAGTCTCTTCAATGCAAATCCTTGAAAAGTATAAATGTGTTCAACTGCCAGAAATTAGAGCTATTTAAGACAGAGCCTGTGAGCTATGAAATTGCTAGGGATGACAGACTATATCTCTCAACTTATCAACCTCTTTTCATCATTGAAGAGGTACTTGCTAATGTGGAGAATCTAACATTGCATAGTAAAGATTTTGGCATGATATTGCACAGCCAATATTCAGAGGACAAATTCAGCAAACTTAAATCTCTGAGGGTGTCCGAATTTACCAATGAAGAAGCTACTTTTCCTTATTGGTTTTTCAAAAATGTACCCAACTTGGATAAGCTAATAGTTGAATGGAGTTCCTTCACAGAGATATTCCAAGACAAAGGACTTATAGGTGAGGAAAGAGAAATCAAAATTAGCACACAGCTCAAAGAGTTGATATTATATGAACTACATAAACTTAGACATATATATAAAGAAGGATTCCAAGTTGACCCTGTTCTTCAGCTTCTTGAAAGCATAGATGTTTATCAGTGTCCCAGTCTAATAAATTTGGTGCCTTCCTCTGTTACCTTTATTTACTTGACTTATTTGGCAGTAGAAAACTGCAATGGGTTGATAAATTTGGTAACATGCTCGACAGCAAAGAGTCTGGTCAAGCTCACAACAATGAAGATTAAAGCATGCAATTTACTAGAGGATGTTGTGAATGGAAAGGAAGATGACATAAACATTGATATTACATTTTGCAGTTTGCAAACTCTGGAACTTATTTCTTTACCAAGGCTCAGCAGATTTTGCTCATGTAAGTGCTTCATTAACTTTCCATTGTTGGAAGAAGTAATTGTAAAAGAATGCCCTCGAATGAAAATATTTTCTTTGGGAGACATGAGCATACCAAATCTTGACAAAGTAAAAATAGAGGAAGATAATGAAGAATATCGTTGGGAGGGTGACCTGAATGGAACAATAAAGAATATGTTTGAAGACAAGGTTGCATTTTATAGATTCAAACATCTGACCTTGTCAGAATATCCAGAGGTCAAGGATTTGTGGTACAGTCAGCTACATCACAATGTTTTTTGCAATTTGAAATCTCTAGTGGTGCAACGATGTGATTTTTTATCACACGTACTTTTTCCATCAAATGTACTGCAACTGCTGCATGAATTGGAAGAGCTAGAAGTAAGCAATTGTGATTCATTAGAAGCAGTGTTTGATGTGAAAGACTTCCAAGAACCTGATCAGGTGGGTGAAGTTCATGATATGCGACAAGCCCTATTTTCTATTGAAAAGGTAAGCTCCAACTTGGAAGCTTTGGCATTAAATGACAAGGATGCTTTGAGAATATTGAATGGTTATTGTCAGGAAAATCTCTTTCATAAAGTAGAACTTCTTTGTTTGCAATGCTTCCATGAAAGTCCAACTTCTTTTCTGAATTGTTTCCATGCAATATTTCCTAATTTAGTAACACTTCAAGTGCGTTATAGTTCTTTTGACACCTTGTTCCTTACAGAAGGAATTGGTCATCTCAGTACACAATCTCCTAAGCAAATAAGAAATTTGTGGCTTTTCGAATTAGAACAACTCAAGTATATTTGGCAGGAAGACTTTCCATTGGATCATCTTGTGGTACATGATCTTGAAGGTTTAAGCGTACGAAATTGTCCAAATTTGATACGCTTGTTACCATCATCGACATCTTTAAAAAATTTAACCTATTTGGAAGTGGACAATTGCAGAGGGCTGATTCATTTGATGACATCCTCAACTGCTAAAGGTCTAGTGCAACTCACAACACTAGTAATAAAAAATTGTGAGATGATATTGGATGTTGTAAATATTGATGAAGAAGAAGCAGAGGAAGACATCATATTTGACAACTTGGAACACGTGGAATTAACTTCTTTGTCAAGTCTTAGAAGCTTCTGCCATGGGAAACACACTTTTGTATTCCCATCTTTGCTACATTTTGTTGTTCAAGGATGTCCTCAAATGAAGATTTTCTCATCAGGAGTCACAGTAGCACCATTCCTGACAGCAATTGTAGTGGAAAACCAAAGGATGCGATGGAAGGATGATCTTAATTCCAGTATTGAACAACTGTTCATTGAGCAGGAAGTCTCACGTTCTAATGCTAAATAA 6663 0.3724 MKHSVEEERRSGKRIETDVVKWLEEVNEVIEKANQLQEDPHRAKVGCSRWSFPNLILRHQLSRRATKIAKVVVQVQGKGKFDRVGYLPPLDGAASSSGTRGDENLLETRETFKEEIVEALKNPKARNIGIYGLGGVGKTDLVKKVFQIAKQEKLFDAVVMANVSKTPDIKRTQGEIADLLGLRFSEKTVAGRAYKLKQRIKEEKTILVILDDIWTRLDLEKVGIPSGKDHDGCKLLMTSRNKEVLLEMDTLKDFTFRLELLSEAETWRLFQFMAGDVVNDMSLQNVATQVAQKCAGLPLRLVTVARALKGRDIYAWKDALMQLQSVDHEGMDAITYSTLELSYNSLESDEMKSVFLLSAVLEEGALHVEYLLIVAMGLGIFKHINTVDDARNRLYKIIGSLKASCLLLEGNTSGQIQMHEIVREVAVSIASRDQHVFVMKERDELKEWPKEDFLKWCRQIILDWCHIHELPPRKSPMVKLPSEIGRLTNLRMLDLRYSGIEVIPPNIISSLTKLEELYMGDTSIKWETENSDKQSENASLAELRQLSNLTVLELQIHEAWILPRDLKLMFEKLQRYKIVIGDVWEWSDIEDGTLKTLKLKLGTNIHLEHGIKALIKGVENLYLDEVDGIRNVLYQLNGEGFPLLKHLHIQNNTKMKHIVDSMERNQVQVSFLNLEKLVLNNLKNLEKICHGPLAVNSFGKLSVIKVQNCFQLKYLLSFSMIKGLSQLSEIEVCQCNSMEKLVLGDVNLSVDNDRSIQKIEFLALRSLTLQHLQALDNFFSSELTSSITERKHQRGEASVPAPFFSFQVAFPNLDTLKLSSLNLNKIWDDNQHSMYKLTSLTVENCGGLKYLFSSTMVGSFMNLKRLEISKCPLMNEIIAIEERNYGTSALKKVRFSKLESIILKDMENLKTVWHNQFDKLKPLQVINCEKIVVVFPSSVQKTYNNLEMLEVIDCALVEDIFELSSNEKRSMEDETLLKEITLSGLPKLKKTWSRDPQGILSFHNLENVDVRSCGSLEYLFPLSVAAYCSHLKELSITWCGNMKEIVAEKKGSVCTAAIFEFNQLSTLLLWNLHKLKGFYAGNHTLACPSLRTIDVSNCAKLNLFKTLSTSSLGRFRNDKLHVPVEQPLFIVEEVIPNLERLTINHRDADMILQAKNLGALFTKITFLGLSYFENTEATFPYWFLQNVHTLKWLYIEWSSFKKIFQDERLSYDIFGDNKLQWADKLNYFSYGEKSVQARNNEGEKLLNKFCSSKCFLKFPLLEEVVVRECPRLKIFSEGNLWAPNLRKVKTAENDEEWHWNGNLNGTIKNMFEDKIAFCNFKRLSLSEYPELKELWYGQLQHNVFRTLKYLVVHKCDFLSDILFQANLQEVLMNLEELDVTDCNSLEAVFDVKGKFTTEILVKNCTQLKKLTLSSLPKLKHVWKEDPHGTLSFQNLCEVSVVKCKSLISLFPLSVARDIIQLQNLQVCECGIEEIVAKEEETKGIIKFVFPHLLSLDLMHLPKLKSFFCGIQSLQCKSLKSINVFNCQKLELFKTEPVSYEIARDDRLYLSTYQPLFIIEEVLANVENLTLHSKDFGMILHSQYSEDKFSKLKSLRVSEFTNEEATFPYWFFKNVPNLDKLIVEWSSFTEIFQDKGLIGEEREIKISTQLKELILYELHKLRHIYKEGFQVDPVLQLLESIDVYQCPSLINLVPSSVTFIYLTYLAVENCNGLINLVTCSTAKSLVKLTTMKIKACNLLEDVVNGKEDDINIDITFCSLQTLELISLPRLSRFCSCKCFINFPLLEEVIVKECPRMKIFSLGDMSIPNLDKVKIEEDNEEYRWEGDLNGTIKNMFEDKVAFYRFKHLTLSEYPEVKDLWYSQLHHNVFCNLKSLVVQRCDFLSHVLFPSNVLQLLHELEELEVSNCDSLEAVFDVKDFQEPDQVGEVHDMRQALFSIEKVSSNLEALALNDKDALRILNGYCQENLFHKVELLCLQCFHESPTSFLNCFHAIFPNLVTLQVRYSSFDTLFLTEGIGHLSTQSPKQIRNLWLFELEQLKYIWQEDFPLDHLVVHDLEGLSVRNCPNLIRLLPSSTSLKNLTYLEVDNCRGLIHLMTSSTAKGLVQLTTLVIKNCEMILDVVNIDEEEAEEDIIFDNLEHVELTSLSSLRSFCHGKHTFVFPSLLHFVVQGCPQMKIFSSGVTVAPFLTAIVVENQRMRWKDDLNSSIEQLFIEQEVSRSNAK 2220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi27g00037 2220 SUPERFAMILY L domain-like 460 877 - -
Sebi27g00037 2220 Gene3D Ribonuclease Inhibitor 1546 1973 IPR032675 -
Sebi27g00037 2220 Gene3D - 95 253 IPR027417 -
Sebi27g00037 2220 SUPERFAMILY RNI-like 977 1385 - -
Sebi27g00037 2220 Gene3D Ribonuclease Inhibitor 796 992 IPR032675 -
Sebi27g00037 2220 Gene3D Ribonuclease Inhibitor 444 792 IPR032675 -
Sebi27g00037 2220 SUPERFAMILY L domain-like 1839 2192 - -
Sebi27g00037 2220 Pfam NB-ARC domain 110 344 IPR002182 GO:0043531
Sebi27g00037 2220 SUPERFAMILY RNI-like 1562 1742 - -
Sebi27g00037 2220 SMART AAA_5 124 264 IPR003593 GO:0016887
Sebi27g00037 2220 Gene3D - 260 347 IPR042197 -
Sebi27g00037 2220 SUPERFAMILY RNI-like 1318 1529 - -
Sebi27g00037 2220 Coils Coil 19 39 - -
Sebi27g00037 2220 PRINTS Disease resistance protein signature 294 308 - -
Sebi27g00037 2220 PRINTS Disease resistance protein signature 858 874 - -
Sebi27g00037 2220 PRINTS Disease resistance protein signature 127 142 - -
Sebi27g00037 2220 PRINTS Disease resistance protein signature 200 214 - -
Sebi27g00037 2220 Gene3D Ribonuclease Inhibitor 993 1229 IPR032675 -
Sebi27g00037 2220 Gene3D Ribonuclease Inhibitor 1974 2197 IPR032675 -
Sebi27g00037 2220 Gene3D Ribonuclease Inhibitor 1371 1542 IPR032675 -
Sebi27g00037 2220 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 945 1276 - -
Sebi27g00037 2220 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 105 356 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi27g00037 Sebi-Chr27 755876 769936 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi27g00037 126 433 WRKY Transcription Factor Family AT5G45050 27.329 1.23e-11 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi27g00037 - - tpra:123924644 1424.84