Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi27g00031 ATGAAGAACTCTGCTTCAGATCAGAGCTTTTACATTGACAGCGATGAAGAAGATGTGGAAAAGGATTTGAACAAAGACGAACAAGATGGAAACGATTCGGATTATTCCAATGACTCCAATGATAACCAGGCACAGAGAAAACCCAGTTCTTACAGCATGGCATGGCCGCAAAGTTACAGGCAATCCATTGATCTATATGGTAGCGTGCCATCACCAAATATAGGATTTCTTGGCACTACATCACTGTCAAGATTAGGCAGTTCTTTTCTCTCTTCAACTTTCATAGGGAAGCACACTCCTGAATTTGTGCCACCAGTGAAAAAGCCTCTGTTACAGCCAGCAGTTGATGAGCAACAGCGACGTAGCTCTCATACCTTGCTTCCTCGCCATCCATCTAGGAAAGCTTCCATTAGGAAGGATGTTTCCAAGGTTTCTCATGAAGTTCATATTCCTGGCCAATGCTCTTTTGGACAAGCTGTGCTTAATGGCATAAATGCCCTTTGTGGTGTAGGAATCCTTTCAACCCCTTACGCCCTTAGAGAAGGTGGATGGACTGCACTTTCTATCTTGTTAATATTTGCAGTGTTTTCCTTTTATACTGGGTTGCTCTTGCGTTATTGCTTGGATAGTGAACCTGGGCTTGAGACATACCCTGACATTGGGCAAGCTGCATTTGGTACTACTGGACGTGTTATCATTTCAATAATATTATACATGGAACTATATGCTTGTTGCATTGAATACATAATTGTGGAGAGCGACAACTTGTCTTCATTATTTCCGTATGCACACCTAAGTTTGGGTGGAATTGAATTGAATTCACACATTCTGTTCGCAATCTTGACAACTGTGGCTCTTCTTCCTACTGTTTGGCTCCGTGACCTACGCATTCTCAGTTATATCTCAGCTTGCGGAGTTATTGCAACGATTGTAGTGGTTCTATGCTTGTTCTGGGTTGGCTTGTTAGACAACGTTGAGTTTCATACCAAAGGAACAACAACACTCAATCTTGCAACTTTTCCTGTTGCTGTGGGTCTCTACGGTTACTGCTATGCAGGACATGCTGTGTTCCCAAACCTCTATACAGCCATGGCAAATCGAAATCAATTCCCTGCAGTGCTCTTAACATGCACCACATATGCTTTGAGTCTATCTCCAGTAGCAATGTGCCTGGAGGAGTTGATACCACCTAACAATTCCAAATTTTACTTATATTCCATCAGCATCAGGACAGTGCTAGTAGTTTCTACACTGCTTGTTGGTCTCTCGGTTCCCTTTTTCGGTTTGGTGATGTCATTGACTGGGTCTTTACTCACAATGTTTGTTTCCTTGATTCTTCCTGCTGCTTGTTTCCTAAGCATCAGGCGTAGCAGAATCTCACGCTTTCAGATAGCACTTTGTACTACAATTATTGTAGTAGGTATTGTATCATGTGCTTTCGGATCATACTCAGCACTCTCGGAGATTATTGAGGAGTTGTTTGGATGA 1488 0.4247 MKNSASDQSFYIDSDEEDVEKDLNKDEQDGNDSDYSNDSNDNQAQRKPSSYSMAWPQSYRQSIDLYGSVPSPNIGFLGTTSLSRLGSSFLSSTFIGKHTPEFVPPVKKPLLQPAVDEQQRRSSHTLLPRHPSRKASIRKDVSKVSHEVHIPGQCSFGQAVLNGINALCGVGILSTPYALREGGWTALSILLIFAVFSFYTGLLLRYCLDSEPGLETYPDIGQAAFGTTGRVIISIILYMELYACCIEYIIVESDNLSSLFPYAHLSLGGIELNSHILFAILTTVALLPTVWLRDLRILSYISACGVIATIVVVLCLFWVGLLDNVEFHTKGTTTLNLATFPVAVGLYGYCYAGHAVFPNLYTAMANRNQFPAVLLTCTTYALSLSPVAMCLEELIPPNNSKFYLYSISIRTVLVVSTLLVGLSVPFFGLVMSLTGSLLTMFVSLILPAACFLSIRRSRISRFQIALCTTIIVVGIVSCAFGSYSALSEIIEELFG 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi27g00031 495 MobiDBLite consensus disorder prediction 1 53 - -
Sebi27g00031 495 MobiDBLite consensus disorder prediction 35 53 - -
Sebi27g00031 495 Pfam Transmembrane amino acid transporter protein 154 376 IPR013057 -
Sebi27g00031 495 PANTHER OS05G0424000 PROTEIN-RELATED 373 475 - -
Sebi27g00031 495 MobiDBLite consensus disorder prediction 114 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi27g00031 Sebi-Chr27 633806 642616 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi27g00031 1 428 Amino Acid or Auxin Permease AAAP Family AT2G39130 59.175 0.0 557
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi27g00031 K15015 - gmx:100781123 728.398