Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi27g00026 ATGCATAAACTACATCCTGATGATCAATTTCTCATCTTTGCTTCTGATGGTTTATGGGAGCAGCTTAGCAACCAAGAGGCTGTTGATATAGTCAGCAATAACCCACGCAATGGAATTGTTAGGAGGCTTGTGAAAGCTGCTCTTAGAGAAGCAGCTAAGAAGAGAGAAATGAGATTCCCAGATCTCCAAAAGATTAAACAAGTTGTGAGGAGACACTTCCATGATGATATTACAGTAGTTGTTGTATTTCTAAATCTAAAATTGATTGATAATAGCTCTATTTGGGGTTCTCCACTTTCAATCAGAGGAGGTTGGCATGCAAATTCTTAG 330 0.3848 MHKLHPDDQFLIFASDGLWEQLSNQEAVDIVSNNPRNGIVRRLVKAALREAAKKREMRFPDLQKIKQVVRRHFHDDITVVVVFLNLKLIDNSSIWGSPLSIRGGWHANS 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi27g00026 109 PANTHER PROTEIN PHOSPHATASE 2 82 IPR015655 GO:0004722|GO:0006470
Sebi27g00026 109 Pfam Protein phosphatase 2C 1 52 IPR001932 -
Sebi27g00026 109 Gene3D - 1 92 IPR036457 -
Sebi27g00026 109 ProSiteProfiles PPM-type phosphatase domain profile. 1 84 IPR001932 -
Sebi27g00026 109 SUPERFAMILY PP2C-like 2 85 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi27g00026 Sebi-Chr27 508696 509107 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi27g00026 1 104 PP2C-type Phosphatase Gene Family AT5G66080 73.333 1.22e-49 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi27g00026 K01102 - gmx:100791448 157.147