Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi279g00031 ATGATACTGATGAAATGGGAAATAAGAAATGTATTTGATAATAGGTGTAGCCTTAGAGACACAGTTGCTGAGTTGTACCCAAGAACTCTTATTTTTTATCTTGCAATGGGAAGAAATGCTTTGGTATTTACTTTATCTTCTTCATTGTATTGGATTCCTAGTGCAGTTGACAGGCATGGCATATTTTTGGAAAAAGTTGGGCTGGTTTCATCAGACTCTGATTCAGGGAAAGGAAAGAGCAAGATGTCAAAGCGCATAACTCATGGCTTTCACTTGGTAAAGGGAAGATCATATCATGCCATGGAGGATTATGTTGTTGCTCAATTTAAGCAAGTTGATAACAATGAATTGGGTTTGTTTGCAATATTTGATGGCCACGCGGGTCACAATGTACCTGATTACTTGCGGTCTCATTTGTTTGATAATATCTTAAAAGAGCCTGACTTCTGGAAAGAACCTGCAAATGCTGTCAAGAGAGCATATAGTATAACTGATTCTAGTATTTTAGAGAAATCAGGTGAATTGGGAAGAGGGGGTTCAACTGCAGTTACGGCAATATTGATCAATTGTCAGAAGTTAGTAGTAGCCAATATCGGGGATTCTCGAGCTGTCTTATGCAAGAAAGGTGTGGCCAAACAACTATCAGTGGATCATGAGCCAATCACAGAACATGAGGATATAAAAAATAGAGGTGGTTTTGTATCAAGATTTCCAGGGGATGTTCCTCGGGTTGATGGTCGGCTAGCAGTGTCAAGGGCATTTGGTGACAAAAGCTTGAAGAAACACTTGAGTTCAGAGCCACATGTGACAGTGGAGGTGATAAATGATGATGCAGAGTTTATTATATTAGCCAGTGATGGATTATGGAAGGTAATGTCAAATCAAGAAGCAGCTGATTTTATCAAAGATATAAAGGATGCTCGGGCTTCAGCAAAGCGCCTTACTGAAGAAGCACTTAACAGGAAAAGCACTGATGATATCTCCTGCATTGTTGTGAAATTTCAGTGA 1008 0.3938 MILMKWEIRNVFDNRCSLRDTVAELYPRTLIFYLAMGRNALVFTLSSSLYWIPSAVDRHGIFLEKVGLVSSDSDSGKGKSKMSKRITHGFHLVKGRSYHAMEDYVVAQFKQVDNNELGLFAIFDGHAGHNVPDYLRSHLFDNILKEPDFWKEPANAVKRAYSITDSSILEKSGELGRGGSTAVTAILINCQKLVVANIGDSRAVLCKKGVAKQLSVDHEPITEHEDIKNRGGFVSRFPGDVPRVDGRLAVSRAFGDKSLKKHLSSEPHVTVEVINDDAEFIILASDGLWKVMSNQEAADFIKDIKDARASAKRLTEEALNRKSTDDISCIVVKFQ 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi279g00031 335 ProSiteProfiles PPM-type phosphatase domain profile. 87 334 IPR001932 -
Sebi279g00031 335 Gene3D - 82 335 IPR036457 -
Sebi279g00031 335 Pfam Protein phosphatase 2C 100 327 IPR001932 -
Sebi279g00031 335 ProSitePatterns PPM-type phosphatase domain signature. 119 127 IPR000222 GO:0043169
Sebi279g00031 335 Coils Coil 297 317 - -
Sebi279g00031 335 CDD PP2Cc 94 334 IPR001932 -
Sebi279g00031 335 PANTHER PROTEIN PHOSPHATASE 82 334 IPR015655 GO:0004722|GO:0006470
Sebi279g00031 335 SMART PP2C_4 77 332 IPR001932 -
Sebi279g00031 335 SUPERFAMILY PP2C-like 83 334 IPR036457 -
Sebi279g00031 335 FunFam Probable protein phosphatase 2C 39 77 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi279g00031 Sebi-Chr279 685199 687203 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi279g00031 64 335 PP2C-type Phosphatase Gene Family AT3G15260 76.277 2.30e-156 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi279g00031 K17506 - gmx:100500617 482.256