Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi279g00018 ATGCCCTCGCGTTTTACACGCTTGGTCCTACATCATCACTACAACGATGGGTGGGTTTTGAACCCTTCTGAGAATTACAATCATTGGGCTGAGAGGAACAGGTTCCAAGTCAGTGACACTCTTGTTTTTAGGTACAAGAAGGGATCAAACTCTGTGTTGGTGGTGAACAAGGATGATTATGATCAATGCAACAAGAAGAACCCTATCAAGAAGTTAGAGGATGGTGACTCTGAGTTTCAGTTTGATCGGTCAGAGAACAACAGCATCATAATCCACCTCCTTTACCATATGTTCCAATTCCTCCCAAAGCTCCTTCCCCTCCTTATGTTTCAACACCCTCCACATACACCTCCTGTGATTCATCCTCCCTATGTTCCAACTCCACCAAAAGCTCCATCCCCTGTGAACCACCCTCCATATGTTCCAACACCACCACAAACCCCTTCCCCTGTTTATAGTCCTCCTTATGTTCCACACCTCCAAAAACACCATCTCCTGTTTATAGTCCTCCCTATGTTCCTACTCCTCCAAAATCTCCCTCACCTATTAATCCACCTTATGTTCCTACACCTCCAAAAACACACATCTCCTGTTTACAGTCCTCCCAGTGTCCCTACTCCTCCAAAATCTCCCTCACCTATTCATCCACCATATGTCCCAACACCTCCAAAAACACCTTCCCCTGTTTACAGTCCTCCCAATGTCCCTACTCCTCCAAAAGCTCCCTCACCTATTCATCATCCACCATATGTACCAATTATACCTCCAAAAACCCCCTGTCCTCCCAATGTTCCTACTCCACCAAAAGCTCCTTCACCTATTCATCCACCTTATGTTCCCATTACACCTCCAAAATCACCTTCTCCTAGTTATAGTCCTCCCAATGTCCCTACTCCTCCAAAGGCTCCATCACCTATTCATCCACCTTATGTTCCAATTACACCTCCAAAAGCTCCTTCACCTATTCATCCACCTTATGTTCCAATTACACCTCCAAAATCACCTTCTCCTGGTTATAGTCCTCCCAATGTTCCTACTCCTCCAAAGGCTCCTTCACCTACCAATCATCCACCCTTTGTTCCAATACCTCCAAAAACTCCATCTCCTTCTTATAGTCCCCCCAATGTTCCTACTCCACCCAAAGCTCCTTCCCCTGGCAATCAGCCTCCCTATGTACCAACTCCTCCAAAAACTCCTTCTCCTATTTCTCAGCCTCCCTACACTCCAACTCCTCCAAAAACTCCCTCTCCTGTTTATAGTCCTCCATCCTCCCAGTGTTCCTACTCCAAGAGCTCCTTCCCAGGCCAACACACTCCATATATTCCAACACCTCCAAAAACTCCCTCTCCTTCTTATAGTCCTCCTAATGTTCCTACTCTCTCCAAAGCCCCTTCCCCTGGCCAACACACCCCATATGTTCCAATTCCTCCAAAAACCCCTTCTCCCATTTCTCAACCTCCATATATTCAAACACCTCCAAGCACTCCCTCTCCAATTTCCCAACCTCCTTATATTCCAACACCTCCAAAAACCCCTTCTCCCATATCCCAACCTCCTATGTTCAAACACCTCCAAGCACTCCCTCTCCAATTTCCCAACCTCCCTATTCAAACACCTCCAAACACTCCTTCCCCAATTTCTCAGCCTCCCTATATTCAAACACCTCCAGGCACCCCTTCTCCCATTTCCCAACCTCCATATATTTCAACACCTCCAAACACTCCTTCCCCAATATCTCAACCACCCTACATCCATACACCTCCAAACACTCCTTCTCCATATTCTCAGCCACCCTATCTCCCAACTCCTCCAAAATCCACTTCCCCCTCTCAACCCCCAGCACCTTTAGTTTCTCCGACAATCACTCCGGCGAGTGCTCCGGTGCCGGCCACAACATCACCACCGTCAATGGCCCCATCAGCCACCACTCCAGCGGCATCACCTCCGGCGTCCCTTCCGGCAGCAGCAACTCCATCACCGTCGTCCACGACTCCGGGATCACCCAAAACGCCATCGTCGTCTAATGAAACGGCACCAGCCAGACCAAACGGAGCGTCGTCTGCAACTCCTTCAGGATTATGGGTGTATTCACTTACTATTTTGGTCGGTGCTGCTCTCACCACTATTCTTGGATAG 2136 0.4831 MPSRFTRLVLHHHYNDGWVLNPSENYNHWAERNRFQVSDTLVFRYKKGSNSVLVVNKDDYDQCNKKNPIKKLEDGDSEFQFDRSENNSIIIHLLYHMFQFLPKLLPLLMFQHPPHTPPVIHPPYVPTPPKAPSPVNHPPYVPTPPQTPSPVYSPPYVPHLQKHHLLFIVLPMFLLLQNLPHLLIHLMFLHLQKHTSPVYSPPSVPTPPKSPSPIHPPYVPTPPKTPSPVYSPPNVPTPPKAPSPIHHPPYVPIIPPKTPCPPNVPTPPKAPSPIHPPYVPITPPKSPSPSYSPPNVPTPPKAPSPIHPPYVPITPPKAPSPIHPPYVPITPPKSPSPGYSPPNVPTPPKAPSPTNHPPFVPIPPKTPSPSYSPPNVPTPPKAPSPGNQPPYVPTPPKTPSPISQPPYTPTPPKTPSPVYSPPSSQCSYSKSSFPGQHTPYIPTPPKTPSPSYSPPNVPTLSKAPSPGQHTPYVPIPPKTPSPISQPPYIQTPPSTPSPISQPPYIPTPPKTPSPISQPPMFKHLQALPLQFPNLPIQTPPNTPSPISQPPYIQTPPGTPSPISQPPYISTPPNTPSPISQPPYIHTPPNTPSPYSQPPYLPTPPKSTSPSQPPAPLVSPTITPASAPVPATTSPPSMAPSATTPAASPPASLPAAATPSPSSTTPGSPKTPSSSNETAPARPNGASSATPSGLWVYSLTILVGAALTTILG 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi279g00018 711 MobiDBLite consensus disorder prediction 261 690 - -
Sebi279g00018 711 MobiDBLite consensus disorder prediction 199 248 - -
Sebi279g00018 711 MobiDBLite consensus disorder prediction 438 461 - -
Sebi279g00018 711 MobiDBLite consensus disorder prediction 469 516 - -
Sebi279g00018 711 PANTHER BLUE COPPER PROTEIN 15 88 IPR039391 GO:0009055
Sebi279g00018 711 MobiDBLite consensus disorder prediction 420 437 - -
Sebi279g00018 711 Pfam Plastocyanin-like domain 18 83 IPR003245 GO:0009055
Sebi279g00018 711 Gene3D - 14 93 IPR008972 -
Sebi279g00018 711 SUPERFAMILY Cupredoxins 15 84 IPR008972 -
Sebi279g00018 711 MobiDBLite consensus disorder prediction 656 690 - -
Sebi279g00018 711 MobiDBLite consensus disorder prediction 533 634 - -
Sebi279g00018 711 MobiDBLite consensus disorder prediction 200 248 - -
Sebi279g00018 711 ProSiteProfiles Phytocyanin domain profile. 10 115 IPR003245 GO:0009055
Sebi279g00018 711 MobiDBLite consensus disorder prediction 261 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi279g00018 Sebi-Chr279 524702 527662 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi279g00018 15 135 Phytocyanin Superfamily AT5G53870 46.032 3.42e-27 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi279g00018 - - gmx:100811987 140.969