Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi277g00051 ATGGATACCCCACGCCCCCATTCTCTGATTCCGAGCTACCTTTACTCATCATCCTCTTTGCCACAGAAGAAGAAGAAGATGGTGGTGGCAGCAGGAGAAGCAGCACCTTTGAATTTGATAATTGGTGCTCCGAGCGAGGGTGGCTATAATATCAAGATGTATTCGCCAGCACATTATGCTGCTTGTGCCGTTGGTGGAAGCCTCTGTTGTGGACTCACTCACATGGCTGTTACACCTCTTGACCTTGTCAAATGTAATATGCAGATTGACCCTGCCAAGTACAAGAGCACCTCCTCTGCATTTGGAGTTATGCTTAAGGAGCAAGGCTTCAGGGGCTTTTTCAGAGGATGGGTACCTACCTTTCTCGGTTATAGTGCACAGGGTGCTTGCAAATATGGGCTCTATGAGGTCTTCAAGAAGCAGTATTCTGATATTGCTGGCCCTGAGTATGCAACCAAGTACAAGACCTTGATCTACCTTGCTGGTTCAGCATCTGCTGAGGTTATTGCAGATGTTGCACTTTGCCCATTTGAGGCCGTGAAGGTCAGAGTTCAAACTCAGCCTGGTTTTGCTAGAGGCCTTGCTGATGGGTTACCAAAATTGGTCAAATCTGAAGGAGTCTCAGGGCTATACAAGGGAATTGTGCCTCTGTGGGGAAGACAGGTTCCATATACAATGATGAAGTTTGCTTCTTTTGAGAACATTGTTGAGATGATCTATAAACATGCCATCCCCACAGGAAAAGAGGATTGCAGCAAAACCCAACAACTAGGTGTGAGTTTTGTTGGTGGATACATAGCTGGTATATTATGTGCAGTTGTGTCTCATCCTGCTGATAACCTTGTCTCTTTCCTGAACAATGCCAAAGGGGCAACGGTTGGTGATGCTGTAAAGAACCTTGGGTTATGGGGTCTATTTACCCGTGGTCTCCCTCTGCGTGTTCTGATGATTGGAACTCTCACTGGAGCTCAATGGGGAATTTATGATGCATTCAAAGTTTTTGTGGGGCTGCCAACCACTGGTGGGGTTGCTCCTACTGCTGTTCCTGCTTCAGCTACTTAG 1062 0.468 MDTPRPHSLIPSYLYSSSSLPQKKKKMVVAAGEAAPLNLIIGAPSEGGYNIKMYSPAHYAACAVGGSLCCGLTHMAVTPLDLVKCNMQIDPAKYKSTSSAFGVMLKEQGFRGFFRGWVPTFLGYSAQGACKYGLYEVFKKQYSDIAGPEYATKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLADGLPKLVKSEGVSGLYKGIVPLWGRQVPYTMMKFASFENIVEMIYKHAIPTGKEDCSKTQQLGVSFVGGYIAGILCAVVSHPADNLVSFLNNAKGATVGDAVKNLGLWGLFTRGLPLRVLMIGTLTGAQWGIYDAFKVFVGLPTTGGVAPTAVPASAT 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi277g00051 353 ProSiteProfiles Solute carrier (Solcar) repeat profile. 255 334 IPR018108 -
Sebi277g00051 353 Gene3D Mitochondrial carrier domain 57 335 IPR023395 -
Sebi277g00051 353 ProSiteProfiles Solute carrier (Solcar) repeat profile. 154 238 IPR018108 -
Sebi277g00051 353 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 46 345 IPR044677 GO:0005315|GO:1990547
Sebi277g00051 353 ProSiteProfiles Solute carrier (Solcar) repeat profile. 57 141 IPR018108 -
Sebi277g00051 353 SUPERFAMILY Mitochondrial carrier 58 330 IPR023395 -
Sebi277g00051 353 FunFam Phosphate carrier protein, mitochondrial 57 335 - -
Sebi277g00051 353 Pfam Mitochondrial carrier protein 58 142 IPR018108 -
Sebi277g00051 353 Pfam Mitochondrial carrier protein 157 242 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi277g00051 Sebi-Chr277 1197524 1200847 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi277g00051 1 345 Chloroplast and Mitochondria Gene Families AT5G14040 72.055 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi277g00051 K15102 - twl:119993760 555.444