Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi277g00049 ATGGCTTGTAAATATATTATTGTATTATACTTCTTGCCTGACCTATTTGCCTGTTTTAGCTTAGCTGTCCGTGATCTTTCAAACTTGGTAAAGGCTGAGGATATTATAACTTCCGAACATTTAACTACCCTTCTAGCAGTTGTTCCCAAGTATTCACAGAAAGATTGGGTGTCAAGCTATGAAACATTGACAAGCTATGTGGTTCCCAGGTCTTCCAAGAAGTTGTATGAGGATAACGAATATGCTCTTTATACTGTAACACTCTTCAACCGTGTTGCAGACAATTTTAGAACTAGTGCACGGGAGAAAGGGTTCCAAATTCGTGATTTTGAATACAGTCCAGAATCACATGAGAGTCGGAAGCAGGAGTTAGAGAAATTGGTGGAAGATCAGGAAAGTTTGAGGGATTCTCTGTTGCAATGGTGTTATACCAGTTATGGAGAGGTTTTCAGCTCCTGGATGCACTTTTGTGCTGTACGTGTATTTACTGAGAGCATTCTGAGATATGGTCTGCCACCATCTTTCTTGGCATGTGTTTTAGCTCCATCAGTCAAAGCTGAGAAGAAAGTACGTTCTATCCTTGAAGGCTTGAGTGATACCGCAAACAGTGCCTACTGGAAGACCGAGGAGGATGTAGGAGGTGGAATGGCTGCCCTAGCAGGTGATGCTGATGCCCACCCTTATGTCTCTTTCACTATTAATCTTGTTTGA 711 0.4191 MACKYIIVLYFLPDLFACFSLAVRDLSNLVKAEDIITSEHLTTLLAVVPKYSQKDWVSSYETLTSYVVPRSSKKLYEDNEYALYTVTLFNRVADNFRTSAREKGFQIRDFEYSPESHESRKQELEKLVEDQESLRDSLLQWCYTSYGEVFSSWMHFCAVRVFTESILRYGLPPSFLACVLAPSVKAEKKVRSILEGLSDTANSAYWKTEEDVGGGMAALAGDADAHPYVSFTINLV 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi277g00049 236 CDD V-ATPase_C 20 233 IPR004907 GO:0033180|GO:0046961|GO:1902600
Sebi277g00049 236 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 20 235 IPR004907 GO:0033180|GO:0046961|GO:1902600
Sebi277g00049 236 FunFam V-type proton ATPase subunit C 23 111 - -
Sebi277g00049 236 Pfam V-ATPase subunit C 20 229 IPR004907 GO:0033180|GO:0046961|GO:1902600
Sebi277g00049 236 SUPERFAMILY Vacuolar ATP synthase subunit C 20 235 IPR036132 GO:0015078|GO:0033180|GO:1902600
Sebi277g00049 236 Gene3D - 17 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi277g00049 Sebi-Chr277 1183251 1187812 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi277g00049 20 235 Primary Pumps ATPases(2) AT1G12840 81.019 7.68e-130 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi277g00049 K02148 - rcu:8273127 394.815