Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi277g00045 ATGTGTGCGGTTGCCACCCCACGTGATCCATATGCAATGCAAATGGTGTTTGTAGACGAAGAGGGAGGGAAGATAGAGGCCATTATTCAGAAGCAGTATATGAAAAAGTTTGCAGAGTGCCTGGTGGAGGGAGAGGTGTACAAGATAACGAATTTCGGTGTCAATTTTAATGGAGGCAAGTTTAGGGCTGCTGGGCACGACTACAAACTATTGTTTACATCATGTACAAAGGTTACTTTGTGTCCTGGAGCTTCAATTCCTGGGTCAGAGCTGTCTCTTCTGAAGACTTCTGAGATCAAGAAAACTAAAAGACATTCGGACTACCTTGTGGATTTCATGGGAGTGGTGATTGCTGTCTCTGAGGAACTCAATATCAACAGGGAGGGAAGACAGACACGACTAGTTGGTAAGATTCGGTGTGCTGTCTTTGGAGATCTTATTAACGTTGTTATGGAGTTCCTAGTTGTCCCACAAAATGGTTTGCCTGTGGTTATAATTCAATTCGCAAGGGTTAATCTGTATAAAGGGGAGGTTGGCATTCAGAATGTCATGAATGCTTCAAAGATTTTATGGAATCCAGATCTTCCACTGGCAGTGGACCTAGCTGTCCATGAAATTGAAACTGAGGTTGCTATCTCAACTATCACTGATAGGCGACGTGCTTCATCCATGAGGGATGAGTTCCTTAAACTGTACAAGGTGAAACGGCTGGTGTCTGATGGGAATGATAATGCCCATTTCATTCTGTGGGATTTAGACTACTACTCGTTGCTTAATAAAACCTGTAAACAGATGCTTGATGATATTGAGGGTCAGCCAGCTGGGTTCTTCCCAGAGGAAATCATGAACTTGATCAAGAAGGTGTGTTGTGATGTGGATATTCTTGCTGAATATAAAGAACAAGTTGATGATGAAACTCCATTAAAGACTGATGCCAATGGTCAAGGACTAGAACTGTCCACATGTTGCAAGTCTATCGTGACTGAGCTTGAAATTACCCCTCCATCATGTGTTGCATCTTCCTCCAATGTGGAGGAAAGTGGGAGCAGTGGTAAGAGGGACGGGGAAGAACATGAAGAGGCTCCACTGGAGAGGAAAAAGAGGGCCAGGGTTAGAGCAGTGAAGGTGGAGAAAAACTAA 1140 0.4377 MCAVATPRDPYAMQMVFVDEEGGKIEAIIQKQYMKKFAECLVEGEVYKITNFGVNFNGGKFRAAGHDYKLLFTSCTKVTLCPGASIPGSELSLLKTSEIKKTKRHSDYLVDFMGVVIAVSEELNINREGRQTRLVGKIRCAVFGDLINVVMEFLVVPQNGLPVVIIQFARVNLYKGEVGIQNVMNASKILWNPDLPLAVDLAVHEIETEVAISTITDRRRASSMRDEFLKLYKVKRLVSDGNDNAHFILWDLDYYSLLNKTCKQMLDDIEGQPAGFFPEEIMNLIKKVCCDVDILAEYKEQVDDETPLKTDANGQGLELSTCCKSIVTELEITPPSCVASSSNVEESGSSGKRDGEEHEEAPLERKKRARVRAVKVEKN 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi277g00045 379 SUPERFAMILY Nucleic acid-binding proteins 13 84 IPR012340 -
Sebi277g00045 379 MobiDBLite consensus disorder prediction 337 379 - -
Sebi277g00045 379 CDD RPA1_DBD_A_like 1 78 - -
Sebi277g00045 379 Gene3D - 84 209 IPR012340 -
Sebi277g00045 379 Gene3D - 5 81 IPR012340 -
Sebi277g00045 379 Pfam Domain of unknown function DUF223 15 82 IPR003871 -
Sebi277g00045 379 SUPERFAMILY Nucleic acid-binding proteins 92 199 IPR012340 -
Sebi277g00045 379 MobiDBLite consensus disorder prediction 349 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi277g00045 Sebi-Chr277 1140434 1142742 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi277g00045 17 201 Core DNA Replication Machinery Family AT5G08020 22.727 3.26e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi277g00045 - - lja:Lj6g3v0884310.1 173.326