Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi277g00040 ATGGCTACCAACACACTGATGAGCTCTGCTATCACAGCCTTCCCTTCTCTTCTTTCTTCCTCAAAATCCAAATTTGCCTCTGCAGTTCCACTTTCCTGCTTTGGTTCCAATGCCTCTTCTCGCTTCACCATGACTGCTGACTGGATGCCAGGCCAGCCTAGACCCCCTTACCTTGATGGCTCTGCTCCTGGTGACTTTGGATTCGACCCTCTTCGTCTTGGTGAAGTGCCAGAGAATCTTGAGAGATTCAAGGAGTCAGAACTCATTCACTGCAGATGGGCCATGCTTGCTGTTCCAGGGATTTTGGTACCAGAGGCATTGGGCTTAGGCAATTGGGTAAAAGCTCAGGAATGGGCAGCAGTTCCTGGGGGCCAAGCAACCTACCTAGGAAACCCTGTTCCATGGGGCACCCTCCCAACCACCATTCTTGTCATTGAATTCCTTTCTATTGCATTTGTGGAGCACCAGAGGAGCATGGAGAAAGACCCAGAGAAGAAGAAATACCCTGGTGGTGCTTTTGATCCTTTGGGATACTCTAAGGACCCTAAAAAGTTCCATGAATACAAAGTTAAAGAAATTAAGAATGGTAAGGACTATTGA 600 0.48 MATNTLMSSAITAFPSLLSSSKSKFASAVPLSCFGSNASSRFTMTADWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAVPGGQATYLGNPVPWGTLPTTILVIEFLSIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPKKFHEYKVKEIKNGKDY 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi277g00040 199 Gene3D Chlorophyll a/b binding protein domain 49 197 - -
Sebi277g00040 199 FunFam Chlorophyll a-b binding protein, chloroplastic 49 198 - -
Sebi277g00040 199 SUPERFAMILY Chlorophyll a-b binding protein 38 197 - -
Sebi277g00040 199 Pfam Chlorophyll A-B binding protein 55 196 IPR022796 -
Sebi277g00040 199 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 44 197 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi277g00040 Sebi-Chr277 1089766 1091437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi277g00040 1 197 Chloroplast and Mitochondria Gene Families AT3G54890 82.915 1.80e-107 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi277g00040 K08907 - gmx:100305992 363.999