Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi277g00035 ATGCTCAGTAGCAGCACTTGTGCTGTCATGTCACCATTGTGTTTTGGGTCTGTGGTCATTGTGTTTTGGCAAAACATGGCCATTGTTTCTGCCATTGTGAACAGGGCGGGAAATCAACTTAGCTTGGCTCCAACATCTGAGATTATTAATTATACAAGCCAACTACTTTCAGATTCTCAAGCTAGAATTCACAGGAGCACCTTGAAGATGCCAGCATTAATTTTGGATGAGAAGGAGAAAATGTTTTCAAAGTTTTTATCTAGTAATGGGCTGATTGATGATCCATTGGCTATTGAGAAAGAAAGGGCTATGATCAACCCTTGGACATCAGAAGAGAGAGAGATCTTCTTGGAGAAATTTGCAGCCTTTGGAAAAGATTTTCGGAAAATTGCATCTTTCCTTGACCACAAGACAACGGCTGACTGTATTGAGTTCTACTACAAAAATCATAAGTCTGATTGTTTTGAGAAAATTAAGAAAAAAGATGGTGGTAAACTACGGAAGTTGTTTACAACCAAAACTGACTTGATGGCATCAGCTTCAGTGATGGCAGGTGGCATTACAGGTAACCGAAAAATGCGCTCAGGAAGTTCCATTTGGAGTGGATATGGTGATTTAAAAACATCAAGGGGTGAGGATAGCATCGCAGAGAGATTAAGTGGTTTTGATGTTCTTCAAGATGAAAGAGAGACTGTAGCAGCTGATGTATTGGCTGGTATATGTGGTTCTCTCCCATCTGAGGTTATGAGTTCATGCATAAACAGTTCAGTTGATCCTGTGGAAGGTAACAGGGATAGGAAAGTGAGATCTCTATGCAAACAATCTGTGGTGCCTGATGTTACTCAGAATATTGACGATGGAACTTGTTCTGATGAGAGCTGTGGTGAAATGGGTCCTACTGATTGGACAGATGGGGAGAAGGCAGCCTTTATTCAGGCTGTATCATCTTTTGGAAAGGATTTCATTATGATTGCACGGTGTGTTGGAACAAGGTCCCGAGATCAGTGCAAAGTGTTTTTCAGCAAGGCTCGTAAATGCCTTGGATTGGATCTTGTGCACCCCAGACCTGAAAATATTGGATCACTAGTGAATGATGATGGAAATGGTGGCAGGAGCGACCCAGATGATGCATGCGTTCTAGAGAAAGGTTCAGTTATTGAGTCTGATATGTCAGGTGCTAAAACAGATGAGGACCTGCCTCCATCTGTCATGAACACATACCATGATGAATCCAGAGCCATGGAGGCTAGGGACCTGTCAGCTGACTTAAATGAATCAAAAAAAATGGGAGGTGCAGTTACAGAATTGGTGTCTGCTTCAGACATAATTGAACCATGCTACACTAATCCTGTTGCTGATAGACTGGTTTCTGAGGTTTCTTCTGGGTGTCGTGGAAATGAATTTGAGGGTTCAGATATCTGTCTCGTTGACAGAGATGATATACATGAAGCTGATACAGATGTTGTAGTTGAATTGAAACACCAAGCCTACCATTCAAGCACTCTAGTTAATACTTCAGTGTCATCTGTAGGCATTTCTTGTTCAAGATTGAGTTTTGGTGCTGAAAACCAGCCCCAATTCTGTCTTGATGGAAAGCCTCATTTATCAGGACCATCGGAGGATCCTCCTCCGACTGCAAATCCAATGTTGCAAAATACTGCTGGTGCTACTGTACAACATGAAAAAACAGCTAGCCAAAATCCACTGTCTTCTACTTGTGATTTTCATGGAAGTAAAGATTTCAGTGGTCATAGTTCCAGTAGTAATGGTGGCTGTCAGCTTCATAATCCTGGGAATCTATTAGACAATGTTGAGGCTGCTAGAATCCTTCAGTGCAATCCTTTGCAAGTGCCTGTTAAGGAGGTGAATGCAGATATAAGGTGCAGCAGTTCAGAGTTGCCTTTTTTGTCCCAAAAGATTGAACAAGCTGATGATAATGGCAAAACACAGTTGCTGTGTTTGTCAGATTCAGAAAAAACATCAAGAAATGGTGATTTGAAACTGTTTGGGAAGATCCTAACCAATCCTTCATCCACCCAGAATCCTACTTTAACTGCCCAGGGAAACGAAGAAAATGGTACCCATCATCCGAAGTTAAGCAGCACCTCTTCTAGTCTAAAATTTACTGGCTGTCACAATGCTAACAGAAAATCTACTATTTTGAAGTTTGATCATAATGATAACCAGGGCCTTGAAAATGTTCCCATCATGAGTTATTGGGATGGGAGCAGAAAACAGCCTGGTTTATTATCATCACTACCTGATTCTGCCATTGTGCTTGCAAAATATCCTGATGCATTTAGTAATTATCCTACATCTTCCAAATTAGAGCAACGGTCATTGCAGATGTTGGCCAAGAATGAACAACACCTGAATGGAGTATCTGCTTTTACAACTACAGAAGACAACGGAAGCAATGGTGTCATTGATTATCAGGTGTTTAGAAATAGGGATGGTCTGAAAGTGCAGCCATTTCTGGTAGATGTAAAGGATCACCAAGATGTGTTCTCTGAGACGCAGAGAATAAATGGTTTTGAAGCAATCTCAAGTTTACAGCAGCAGGGTAGGGGAATGGTGGGACTGAATGGTGTTGGGAGATCAGGGATTCTTGTGGGAGGATCAGGCGCTGGAGTCTCAGATCCTGTGGCTGCCATCAAAATGCATTTTTCCAATGCTGACCAATATGGCAGTCAGACTGGGAGTATCATGAGAGGATGA 2718 0.418 MLSSSTCAVMSPLCFGSVVIVFWQNMAIVSAIVNRAGNQLSLAPTSEIINYTSQLLSDSQARIHRSTLKMPALILDEKEKMFSKFLSSNGLIDDPLAIEKERAMINPWTSEEREIFLEKFAAFGKDFRKIASFLDHKTTADCIEFYYKNHKSDCFEKIKKKDGGKLRKLFTTKTDLMASASVMAGGITGNRKMRSGSSIWSGYGDLKTSRGEDSIAERLSGFDVLQDERETVAADVLAGICGSLPSEVMSSCINSSVDPVEGNRDRKVRSLCKQSVVPDVTQNIDDGTCSDESCGEMGPTDWTDGEKAAFIQAVSSFGKDFIMIARCVGTRSRDQCKVFFSKARKCLGLDLVHPRPENIGSLVNDDGNGGRSDPDDACVLEKGSVIESDMSGAKTDEDLPPSVMNTYHDESRAMEARDLSADLNESKKMGGAVTELVSASDIIEPCYTNPVADRLVSEVSSGCRGNEFEGSDICLVDRDDIHEADTDVVVELKHQAYHSSTLVNTSVSSVGISCSRLSFGAENQPQFCLDGKPHLSGPSEDPPPTANPMLQNTAGATVQHEKTASQNPLSSTCDFHGSKDFSGHSSSSNGGCQLHNPGNLLDNVEAARILQCNPLQVPVKEVNADIRCSSSELPFLSQKIEQADDNGKTQLLCLSDSEKTSRNGDLKLFGKILTNPSSTQNPTLTAQGNEENGTHHPKLSSTSSSLKFTGCHNANRKSTILKFDHNDNQGLENVPIMSYWDGSRKQPGLLSSLPDSAIVLAKYPDAFSNYPTSSKLEQRSLQMLAKNEQHLNGVSAFTTTEDNGSNGVIDYQVFRNRDGLKVQPFLVDVKDHQDVFSETQRINGFEAISSLQQQGRGMVGLNGVGRSGILVGGSGAGVSDPVAAIKMHFSNADQYGSQTGSIMRG 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi277g00035 905 Gene3D - 259 357 - -
Sebi277g00035 905 Gene3D - 84 156 - -
Sebi277g00035 905 ProSiteProfiles SANT domain profile. 103 154 IPR017884 -
Sebi277g00035 905 MobiDBLite consensus disorder prediction 672 705 - -
Sebi277g00035 905 SMART sant 104 152 IPR001005 -
Sebi277g00035 905 SMART sant 298 346 IPR001005 -
Sebi277g00035 905 MobiDBLite consensus disorder prediction 529 551 - -
Sebi277g00035 905 ProSiteProfiles SANT domain profile. 297 348 IPR017884 -
Sebi277g00035 905 Pfam Myb-like DNA-binding domain 301 341 IPR001005 -
Sebi277g00035 905 Pfam Myb-like DNA-binding domain 107 148 IPR001005 -
Sebi277g00035 905 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 33 432 - -
Sebi277g00035 905 SUPERFAMILY Homeodomain-like 300 348 IPR009057 -
Sebi277g00035 905 SUPERFAMILY Homeodomain-like 91 151 IPR009057 -
Sebi277g00035 905 CDD SANT 302 340 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi277g00035 Sebi-Chr277 926670 929797 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sebi277g00035 Myb_DNA-binding 1e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi277g00035 - - lang:109337705 926.391