Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi277g00019 ATGCATGGATTCTCAGACATTTCAACCCAATTGCAAAAATCACTATCTGAGGCACTAACCATTTTCTACCCTCTTGGAGGTAGAAGAAGTGATTCCTTCTCCATCAATTGCAACGATGAGGGTGCAATTTACATTGAAGCCTCAGTGAATATCAACATGGACAAGTTCCTAAAACCACCCAAAATAGAATTGATAAACAAATTGCTTCCATGTGAGCCAAACAAAAAGCACCCTTACCAACAAGTCTTGCCACAACTTCAAGTCCAAGTGAACATTTTCAATTGTGGAGGGATAGCTATTGGGTTGTGCAATCTCCACACCATCCTTGATGCATTGTCTTGTAGTGCCTTCTTGAAAACTTGGTCTTCCATTTGCAATGGTTCAAGGGATGGAATTTCATGGCCAGATTTCTCCTCTGCTTCTTCTCTGTTCCCTCCAAGAAACACCTTTGGTGTACGTGCTGGTGTACTGAATATTGACAAAAGCTCAGAGATAGAAGTTCAGTGCACCACAAGAAGATTCTTGTTCATGACCAAATCAATCAATGAACTTCAAGCCATGTCTGAAAATGATGGAATCTACAAGAGTCCTACACGTTACAAGGCAGTGTCTTCATTCATCTGTAAACACATGATTGTAGCATGCACAGAGGAACCTTGTGACAGAACTAGGCCAGTAGTAGTGTTACATGTTGTGGACATGAGGAAAAGGATGGGAGAACCATTCTCACAAGATTCTATTGGGAACTTGTTGTGGCCTGCAGTGGTGCTTTGTGAGAATGTTAACAAGGACACTAAAGTTGGAGATTTGGTTAGACTTTTAGAGCAAGAAATTGGAAAGCTTACAAAGGAATTGTTTCTAAAAGTGCAAAATGATCCTGGTTTTATGTGGAGTGATGAGTGTGCACAACTAATGCTTGAAGGAATAGCCAACAAAAACCCAATTTCGTTTGTGTTCACGAGCTGGGTTAATATGGGATTCAGAGAATTGGACTTTGGTTGGGGAAAGCCTTTATGGCTGGCTCAACGAGGAGGCACAAAGGAAAGTATTCCAAACACAGTAGTGTTGATGGAAACGGATGAGGGAATAGAGGCGTGGGTGACAATGGAAGAGAAACATATTACTACCTTGGAAAATGATGTAGAGTTCCTCAGATTAGCTTTGCTTAATCCTAGTGTTTCAAACATATAG 1191 0.4089 MHGFSDISTQLQKSLSEALTIFYPLGGRRSDSFSINCNDEGAIYIEASVNINMDKFLKPPKIELINKLLPCEPNKKHPYQQVLPQLQVQVNIFNCGGIAIGLCNLHTILDALSCSAFLKTWSSICNGSRDGISWPDFSSASSLFPPRNTFGVRAGVLNIDKSSEIEVQCTTRRFLFMTKSINELQAMSENDGIYKSPTRYKAVSSFICKHMIVACTEEPCDRTRPVVVLHVVDMRKRMGEPFSQDSIGNLLWPAVVLCENVNKDTKVGDLVRLLEQEIGKLTKELFLKVQNDPGFMWSDECAQLMLEGIANKNPISFVFTSWVNMGFRELDFGWGKPLWLAQRGGTKESIPNTVVLMETDEGIEAWVTMEEKHITTLENDVEFLRLALLNPSVSNI 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi277g00019 396 Gene3D - 1 154 IPR023213 -
Sebi277g00019 396 PANTHER F21J9.9 6 385 - -
Sebi277g00019 396 Pfam Transferase family 8 383 - -
Sebi277g00019 396 Gene3D - 167 386 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi277g00019 Sebi-Chr277 488179 489369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi277g00019 11 378 Monolignol Biosynthesis Gene Families AT5G48930 22.564 2.25e-19 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi277g00019 - - gmx:102667966 620.928