Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi276g00021 ATGGAGATTTCATCCATCAGAGGTTTACCTGATCAGGAAATGATGGAGGATCCTACCTTTCTCCATCAGTGGCACTTGAGTTCTATTAATGATCCTAGCTTACTACCAATAGCTGCTGCTTTTGGAGAGACTTTACAACAACATTCATTCACTTATCCAAACTTCAACCCCAGAACTTCCATGGAAACTGCACTTGCTGATATTGAAAGACCCACAAAACATCTCAAAATAAATACTGCTCAGACACCAGAGACACAATTTGTTACTTGCCCTGATCTTCTTTCATTTGTGGATTCCAATTACTTAAATCAGTTGGGATTAGTACTTAAGCATAAAGATGAAATGGTTTGTCCTAAAATCAATTGCACAACCCCTCCAGACATGATCTCTCAAGAAACTTTGGAGAATCAAAACTATGTCTTCAGGACTTGCCATGAGGCCAAAAAGATAGGGACACGTTCTAGGCTTTCTCAACCTCAAGACCACATAATGGCTGAAAGAAAAAGGAGAGAGAAGCTCAGCCAGAGGTTCATTGCTTTATCTGCCCTTGTTCCTGGACTACAAAAGACAGATAAAGCTTCTGTTCTTGGAGATGCAATCAAGTACTTGAAGCAGTTGCAGGAGAAAGTGAGGGCTCTTGAGGAGGAACAGAACATGAAGAAAAATGTGGAATCTGTGGTGGTTGTGAAGAAATCTCAACTATCCAATGATGTTGAAAACTCTTCTTCAGAAACTGGTGGTCCCTTTGATGAGGAACTTCCTGAAATTGAAGCAAGATTTTGTGAGAGAAATGTCCTCATAAGAGTTCACTGTGAGAAGAGCAAAGGAGTTGTAGAAAATACAATCCATGAAATTGAGAAATTCCATCTTAAAGTCATCAATAGCAGTGCCATGACATTTGGGAGCTGTGCCCTTGATATAACAATTATTGCTCAGATGGATGTGGGATTCTGCATGACAGTGAAGGATCTTGTGAGAAACCTACGCTCAGCTTTTTCCTCTTTTATGTGA 1011 0.4006 MEISSIRGLPDQEMMEDPTFLHQWHLSSINDPSLLPIAAAFGETLQQHSFTYPNFNPRTSMETALADIERPTKHLKINTAQTPETQFVTCPDLLSFVDSNYLNQLGLVLKHKDEMVCPKINCTTPPDMISQETLENQNYVFRTCHEAKKIGTRSRLSQPQDHIMAERKRREKLSQRFIALSALVPGLQKTDKASVLGDAIKYLKQLQEKVRALEEEQNMKKNVESVVVVKKSQLSNDVENSSSETGGPFDEELPEIEARFCERNVLIRVHCEKSKGVVENTIHEIEKFHLKVINSSAMTFGSCALDITIIAQMDVGFCMTVKDLVRNLRSAFSSFM 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi276g00021 336 Gene3D - 155 231 IPR036638 GO:0046983
Sebi276g00021 336 Coils Coil 196 226 - -
Sebi276g00021 336 PANTHER BHLH TRANSCRIPTION FACTOR 41 334 - -
Sebi276g00021 336 Pfam Helix-loop-helix DNA-binding domain 160 207 IPR011598 GO:0046983
Sebi276g00021 336 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 161 221 IPR036638 GO:0046983
Sebi276g00021 336 SMART finulus 163 212 IPR011598 GO:0046983
Sebi276g00021 336 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 157 206 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi276g00021 Sebi-Chr276 573470 575113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi276g00021 1 336 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 39.835 1.28e-58 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sebi276g00021 HLH 2.9e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi276g00021 - - vun:114179595 469.544