Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi276g00016 ATGTTCATGCTGTATTCAATTGACAAGCAAGTGCCACTACTATCACGGGGTGCTAGTCATGGGGTTTTTCATAGGACTACTGTGTCAGAAAACTTCTTTCAAAGGAAGCCTCTCAATGTTCCTTCATTTTCTGGTTGGAAAGGATTCTATTTCTCTAAGTATAGGCCACTGCGTTGGGATAGGCTACAGACAAGCGTAGCATATGATGTTGCCGGTGCTGTTGAAGTCATCAATGATTTAGGATTGGACACACTTACTTTCTTGGCTGTGACTGTCTTAATTGTGCCTTCATTCAAGTTAATTAAAGCCAGTCCTATACTTGGTTTCTTCTGTGCTGGGGTGGTACTCAATCAGTTTGGTTTAATTAGGAACCTTACAGATGTTAAAGTTTTGTCTGAATGGGGGATCCTTTTCTTGCTGTTTGAGATGGGTTTAGAACTTTCACTAGCACGTCTGAAAGCTCTTGCAAAATATGCCTTTGGAATGGGATTGGCTCAGGTTGTACTATCTACTTTAGCATTTACTGCTTTTGAACTTCCACCAAATGGGGCTATTGGAACAAAAATTTTGGAATTCCTTTTCCACTCAAGGCCTGATCTGGTGAACATCAGAAGTGTCGATGAAGCTGTAGTGATTGGTGCTGCTCTCTCTCTGTCATCTTCTGCATTTGTTCTACAGCTTCTTGCAGAGAGAGGTGAGCTTCCTACAAGATTTGGTTCAGCTACTCTTGGAATACTTCTTTTGCAGGACTTAGCTGTTGTCCCACTTCTGGTCATACTTCCAATATTAGAGACCCAGAATATGTCTGAGGAAAGTATTTGGCCCATGCTTGCTCAAGAAAGTTTAAAGGCATTAGGTGGATTAGGTCTGCTTTCTCTTGGGGGAAAGTATATTCTCAGAAGAGTTTTTGAGGTTGTTGCAGATACAAGGAGCTCAGAGGCTTTTGTTGCTCTCTGCTTGCTGACTATTGCAGGGACTTCACTAGTCACACAGAATTTGGGCTTCAGTGATACACTTGGAGCATTTTTAGCTGGGGCAATCTTAGCAGAGACAAATTTCAGGACCCAGATTGAAGCTGACATAAGACCATTCAGGGGCTTGCTGCTTGGATTGTTTTTTCTAACTACAGGGACTTCAATTGACATGCAGCTCCTTTTGCGAGAGTGGCCAAATGTACTTTCGCTCTTGGGGGGTTTAATTGCTATCAAGACATTGATCATAACTGCGATTGGTCCTCGTGTTGGGCTTACTTTACAAGAAAGTGTAAGAATAGGATTGCTTCTATCCCAAGGAGGCGAGTTTGGATTTGTGGTATTCTCTTTAGCAAATAGGCTTGGGGTGCTTCCACTTGAGCTCAACAAGCTGCTTATAATTGTTGTTGTATTGTCAATGGCATTAACCCCATTTCTGAATGAAGCTGGAAGGAGGGCTGCTAGTTTTATTGAAGACAAATCTGATGCTGAGAATAAACAGAAAGCTTCTGGCATGGTTGACTTCAATGCTAGTGAACCTGTTGTTATCCTTGGATTTGGACAAATGGCCCAGGTCCTGGCCAATTTCCTGTCCAACCCATTGGCTTCAGGAGGAGATAATGATGCAACAGGATGGCCGTATGTGGCATTTGATCTTGACCCCAGGGTAGTAAAGGCAGCTAGAAAACTTGGTTTTCCAATTCTCTATGGGGATGGATCACGTCCAGCCGTCCTTCAATCTGCTGGTATCCAATCTCCAAAAGCTATCATGGTTATGTACACTGGGAAGAAGAAGATAATTGAAGCTGTTCAGAGTTTACGATTGGCTTTTCCTGCAGTCCCAATCTATGCCAGAGCTCGAGATCTCAAGCATCTTTTAGATTTGAAGAAAGCAGGTGCAACAGATGCCATTTTGGAAAATGCTGAGACTAGCTTACAGCTGGGTTCTAAGCTGCTGACAGGCCTTGGGGTGATGTCTGACGATGTAGCATTTTTGAGTCAGATTATTAGAGATTCCATGGAGGTACAAGCTCAAGAAGCAATCAACCAATCAGAATATCGTGAATTAGATATTATGAAACCACTGCAGGTGAGAGTTGCTGATGTGAAGGAGGCACGTGCACCGATGACAACAACTTCAGCAGAATATGAATTATCAGTACTGAACCAGAAAGATCAAGCTTCATTGGATAGGATTCAGAAGGAAGTAGACTCTGAAAAACAAGATTATGAACAAAATCAAGCTGTTAAATTAGAAGGAAATGGTGTTTTATGTAGCAAAGAAGATACTGAAGAAAGCTCAATGGTTGTAACTCAAGATGCTCTAGGACAGAAGAATCTGGTAGACTCATCAATCCCTTCCCACACTGCCATGGAGGAACCTGACAATGTAGATAGGGTTTCTTCCCATTAG 2385 0.4235 MFMLYSIDKQVPLLSRGASHGVFHRTTVSENFFQRKPLNVPSFSGWKGFYFSKYRPLRWDRLQTSVAYDVAGAVEVINDLGLDTLTFLAVTVLIVPSFKLIKASPILGFFCAGVVLNQFGLIRNLTDVKVLSEWGILFLLFEMGLELSLARLKALAKYAFGMGLAQVVLSTLAFTAFELPPNGAIGTKILEFLFHSRPDLVNIRSVDEAVVIGAALSLSSSAFVLQLLAERGELPTRFGSATLGILLLQDLAVVPLLVILPILETQNMSEESIWPMLAQESLKALGGLGLLSLGGKYILRRVFEVVADTRSSEAFVALCLLTIAGTSLVTQNLGFSDTLGAFLAGAILAETNFRTQIEADIRPFRGLLLGLFFLTTGTSIDMQLLLREWPNVLSLLGGLIAIKTLIITAIGPRVGLTLQESVRIGLLLSQGGEFGFVVFSLANRLGVLPLELNKLLIIVVVLSMALTPFLNEAGRRAASFIEDKSDAENKQKASGMVDFNASEPVVILGFGQMAQVLANFLSNPLASGGDNDATGWPYVAFDLDPRVVKAARKLGFPILYGDGSRPAVLQSAGIQSPKAIMVMYTGKKKIIEAVQSLRLAFPAVPIYARARDLKHLLDLKKAGATDAILENAETSLQLGSKLLTGLGVMSDDVAFLSQIIRDSMEVQAQEAINQSEYRELDIMKPLQVRVADVKEARAPMTTTSAEYELSVLNQKDQASLDRIQKEVDSEKQDYEQNQAVKLEGNGVLCSKEDTEESSMVVTQDALGQKNLVDSSIPSHTAMEEPDNVDRVSSH 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi276g00016 794 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 67 731 - -
Sebi276g00016 794 FunFam K(+) efflux antiporter 3, chloroplastic 79 478 - -
Sebi276g00016 794 MobiDBLite consensus disorder prediction 770 794 - -
Sebi276g00016 794 Gene3D - 79 478 IPR038770 -
Sebi276g00016 794 Coils Coil 713 740 - -
Sebi276g00016 794 ProSiteProfiles RCK N-terminal domain profile. 504 636 IPR003148 GO:0006813
Sebi276g00016 794 Gene3D - 504 675 - -
Sebi276g00016 794 Pfam Sodium/hydrogen exchanger family 86 471 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Sebi276g00016 794 FunFam Glutathione-regulated potassium-efflux system protein KefB 502 674 - -
Sebi276g00016 794 Pfam TrkA-N domain 505 628 IPR003148 GO:0006813
Sebi276g00016 794 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 504 642 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi276g00016 Sebi-Chr276 498592 509884 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi276g00016 4 698 Inorganic Solute Cotransporters AT4G04850 74.714 0.0 997
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi276g00016 K03455 - gmx:100798214 1227.62