Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi275g00035 ATGGCTTCCCTTGCTGCTTCCACAGCAGCTGCTTCCCTTGGCATGTCAGAAATGCTTGGAAATCCCATCAACTTGAGTGGTGCCACAAGGTCAGCCCCATCTCCCTCTACCCCTGCTACCTTCAAAACTGTGGCCCTTTTCTCCAAAAAGAAGGCACCACCACCACCTCCTCCAAAGCAGAAAGCTGCTGCTGTTTCTTCTGCCAATGATGAGCTCGCCAAGTGGTATGGTCCTGATAGAAGGATCTTCTTGCCAGATGGTCTCTTGGACCGATCTGAGATCCCAGAGTACTTGACTGGAGAAGTCCCTGGAGACTATGGTTATGACCCATTTCGTCTTAGCAAGAAGCCAGAGGACTTTGCCAAATATCAGGCATATGAGTTGATTCATGCCAGATGGGCAATGCTTGGTGCTGCTGGATTCATCATTCCTGAGGCCTTCAACAAATTTGGAGCCAACTGTGGTCCTGAGGCTGTTTGGTTCAAGACTGGAGCTCTGCTTCTTGATGGTGGAACGTTGAACTACTTCGGTAAACCCATCCCCATCAATCTTATTGTTGCAGTAGTTGCTGAGGTTGTTCTTTTGGGAGGTGCAGAGTACTACAGAATTATTAATGGCCTGGATTTTGAAGACAAGCTTCATCCAGGTGGTCCATTTGACCCATTGGGGCTTGCAAATGATCCAGACCAAGCTGCACTGTTAAAGGTGAAGGAAATTAAGAATGGAAGACTTGCTATGTTTGCCATGCTTGGTTTCTACTTCCAAGCTTATGTCACAGGAGAAGGTCCTGTTGAGAACTTCACAAAACATCTCAGTGACCCTTTTGGCAACAACTTGCTCACTGTCATTGCAGGGAATGCTGAGAGGGTTCCAACTCTGTGA 882 0.4762 MASLAASTAAASLGMSEMLGNPINLSGATRSAPSPSTPATFKTVALFSKKKAPPPPPPKQKAAAVSSANDELAKWYGPDRRIFLPDGLLDRSEIPEYLTGEVPGDYGYDPFRLSKKPEDFAKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGGTLNYFGKPIPINLIVAVVAEVVLLGGAEYYRIINGLDFEDKLHPGGPFDPLGLANDPDQAALLKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENFTKHLSDPFGNNLLTVIAGNAERVPTL 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi275g00035 293 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 40 291 IPR001344 GO:0009765|GO:0016020
Sebi275g00035 293 FunFam Chlorophyll a-b binding protein, chloroplastic 82 293 - -
Sebi275g00035 293 Pfam Chlorophyll A-B binding protein 95 256 IPR022796 -
Sebi275g00035 293 Gene3D Chlorophyll a/b binding protein domain 82 293 - -
Sebi275g00035 293 MobiDBLite consensus disorder prediction 45 64 - -
Sebi275g00035 293 SUPERFAMILY Chlorophyll a-b binding protein 75 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi275g00035 Sebi-Chr275 1090003 1092656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi275g00035 11 293 Chloroplast and Mitochondria Gene Families AT4G10340 81.338 9.89e-152 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi275g00035 K08916 - gmx:100806585 528.094