Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi275g00017 ATGGTTCCACCACTTTGTGCTAATGGTTGTGGCTTTTACGGTTCCGCTGAAAACAAGAACCTTTGTTCAAAGTGCTACATAGATTATCTCAAACAGAACACCTCTGTTCTTGAGTCATCTCCTTCTCATAAAGAGGATCCTGTTGTTACTGATGTTTGTGCTGCTGTTTCTGCTATTACACTCAACGACTCTACCACCATAAAGAACACCACAAATAGATGCAAGTGTTGCAACAAAAAAGTTGGACTCACAGGATTCAAGTGTCGTTGTGGAGATGTGTTTTGTGGTAGGCATAGGTACCCAGAAATGCACCCATGTAATGTGGATTTGAAAAAGATTGGTAGTGAGACTTTGGCTAAACAAAATCCCAAATGTATTGGTGATAAGTTAGAAGACAGAATCTAG 405 0.4 MVPPLCANGCGFYGSAENKNLCSKCYIDYLKQNTSVLESSPSHKEDPVVTDVCAAVSAITLNDSTTIKNTTNRCKCCNKKVGLTGFKCRCGDVFCGRHRYPEMHPCNVDLKKIGSETLAKQNPKCIGDKLEDRI 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi275g00017 134 Gene3D - 50 127 IPR035896 -
Sebi275g00017 134 SUPERFAMILY AN1-like Zinc finger 63 128 IPR035896 -
Sebi275g00017 134 Pfam A20-like zinc finger 5 26 IPR002653 GO:0003677|GO:0008270
Sebi275g00017 134 Pfam AN1-like Zinc finger 74 107 IPR000058 GO:0008270
Sebi275g00017 134 SMART A20_3 3 27 IPR002653 GO:0003677|GO:0008270
Sebi275g00017 134 PANTHER AN1-TYPE ZINC FINGER PROTEIN 3 131 - -
Sebi275g00017 134 FunFam Zinc finger AN1-type containing 6 50 129 - -
Sebi275g00017 134 ProSiteProfiles Zinc finger AN1-type profile. 68 114 IPR000058 GO:0008270
Sebi275g00017 134 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 35 - -
Sebi275g00017 134 SMART AN1_Zf_4 74 111 IPR000058 GO:0008270
Sebi275g00017 134 Gene3D - 1 48 - -
Sebi275g00017 134 ProSiteProfiles Zinc finger A20-type profile. 1 34 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi275g00017 Sebi-Chr275 497505 497909 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi275g00017 5 131 C2H2 Transcription Factor Family AT3G52800 37.342 4.68e-25 92.0