Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi275g00015 ATGGTTCCACCACTCTGTGCTAATGGTTGCGGCTTCTACGGTTCTGCTGCAAACAACAACCTCTGTTCCAAATGTTTCAAAGAAAACATCATCAAATCAAATAAAGAAGGTGTCGTGTACTGTAAAAGCAAGATCTTGAAGGGTGAAACCTCTGTTCTTGAGTCATCTCCTTCTCATAAGCCATCTGCTTCTGAGAGCTCTATTCCTGATGTTTGTTCTGCTATTACACTCACTGATCAATCTACAAGCTCAAAGAACAAGACAAATAGGTACCCAGAAGTGCACGCATGTAAAGTGGATTTCAAAACAATTGGTCGCCAAGCTTTGACCAAACAAAATCCTAAATGTATCCATGATAAGTTAGAATACAGGATCTAG 378 0.3995 MVPPLCANGCGFYGSAANNNLCSKCFKENIIKSNKEGVVYCKSKILKGETSVLESSPSHKPSASESSIPDVCSAITLTDQSTSSKNKTNRYPEVHACKVDFKTIGRQALTKQNPKCIHDKLEYRI 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi275g00015 125 SMART A20_3 3 27 IPR002653 GO:0003677|GO:0008270
Sebi275g00015 125 ProSiteProfiles Zinc finger A20-type profile. 1 34 IPR002653 GO:0003677|GO:0008270
Sebi275g00015 125 Gene3D - 1 69 - -
Sebi275g00015 125 Pfam A20-like zinc finger 5 27 IPR002653 GO:0003677|GO:0008270
Sebi275g00015 125 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 39 - -
Sebi275g00015 125 SUPERFAMILY AN1-like Zinc finger 89 118 IPR035896 -
Sebi275g00015 125 PANTHER AN1-TYPE ZINC FINGER PROTEIN 3 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi275g00015 Sebi-Chr275 485252 485707 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi275g00015 5 122 C2H2 Transcription Factor Family AT3G52800 27.097 1.06e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi275g00015 - - gmx:102663114 114.005