Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi274g00017 ATGGAATTTAACAAGGACTTTATGGATGGTTGTTCTACATTTTGGACTGATGAAAATTCTGAGAGCAACCGAGATGAGTCACGTAATGGGGATGGAAACCCGGTGGGAGACCAAGCCGGGCTGTCATGGGGCAGGAGGATGATACATGAACTAACACATGATGACATTAGACGTCTGGAGTTCGGTTCTGAGGGTGAGGCATATAGTTTTTATTCGGATTATGCCAAACAACGAGGGTTTGCTGTGAGGAAAGATGATATTGAGCAAAATGAGAATGGTGATATTGTTAAGCGGTATTTAGTGTGTAATAAGGAGGGAACAAGGGACAAGAAACACTTGGAGAGAAAAGACAGAGTGAGGGAGGCGGGGCCAATTACTCGTGTGCAGTGCACAACAAGGATACGTGTTTACTTAGATATGAGGAGTGGGAAATGGAAGGTGTCTGCATTCCACGACGATCATAACCATGAGTTAACTCCTCCAACGTATGTTCACATGATTCCAGCTTATAGACGATTGAGTGAATCTGATAAAGCTCAAATTGATACCCTGCATGCAGCCGGTGTGAGAACTTGCCATATTATGAGTTTTATGATTGGACAGAAAGGGGGACATGGTGAATTAGGTTTCTGTAAAAAGGACATGTATAACCACATTGATAAACAGAAGAGGGCTAATATAGAGGACGGTGATGCATTTGCAGCGCTGTGTTATTTGCAGGGAAAGTGGGTCCAGAAAATGTATGACATGAAGAGGTTATGGGAAAATTCATATATGGGAGACACATTTTACGGTGGTATTAGAACAACGTCTGTGTGTGAGGAGATTAGTTCGTTCATTAAGAGGTATGTCCAAAATAGGAACAGCCTGGTGAACTTCCTTCACAACTTTGACAAGGCGTTAAAGGAGTATAGACACAATGAATTGATTTCTGATTTTAAGTCATTTTACGGAGAACCTGTATTGACCACATCTCTTTTTACCATTGAGGAATGTGCCTCCAAAGTGTTCACTAGGAAAAAGTTTTGGGAAGTTAAGTCTTCGATTGAGAGTGCGGCTGCGTACAATGTAGTGGATAGGGTTGTGACTAGTGAGACTGTGAGAATGTTTGAGTCATGTGGCATTCCCTGCCGTCACATTTTTTGTGCAATGAAGAATGAGCATGTGAAAACCATTCCAAGTAGCCTAAAACTGAAGCGATGGACAAAATCAGCGAAGCCTGATTTCATGTCCAGTGAGCCCGTTGTGAGGCGCACCAAGGAAGAGCAGAAGGATGACGAAAGGCAGAAGCTGAAGACGATGAATCTTCGTGGGAGAGTGATGGTTCCATGGGAAATGATAAATCAAAGAGGATCGGCCGATACAAGCAAAGGGAAGAGGCGGTGTGTGTCTCCACCATCCCAAACATCCTTCGATCGTGCTGAATTGCAGGGACTACATGACAAGGTTGGTGAAAGACAAGCCAAGCAAAGTAGACGTTCAAATGGCAAGCAGAAAAATAAAGGAGTAGACGGAGCAGGAGAGGAGATGAAGTTTGGACCTGGGAAGATGGGTCCAGGAGCGGGTGTTAACAATGTTAATATGCTCCCAACTTCCCTTTTTCCTCATTTCCCATCAACGAGCATGTATCCCCCTCCCCCATGTCCGCGGCCTCCACTCTATGCTCCGTTTTATGGATACGGGTCATACGGTTATTATGGGCAGCCTCAATAG 1713 0.4425 MEFNKDFMDGCSTFWTDENSESNRDESRNGDGNPVGDQAGLSWGRRMIHELTHDDIRRLEFGSEGEAYSFYSDYAKQRGFAVRKDDIEQNENGDIVKRYLVCNKEGTRDKKHLERKDRVREAGPITRVQCTTRIRVYLDMRSGKWKVSAFHDDHNHELTPPTYVHMIPAYRRLSESDKAQIDTLHAAGVRTCHIMSFMIGQKGGHGELGFCKKDMYNHIDKQKRANIEDGDAFAALCYLQGKWVQKMYDMKRLWENSYMGDTFYGGIRTTSVCEEISSFIKRYVQNRNSLVNFLHNFDKALKEYRHNELISDFKSFYGEPVLTTSLFTIEECASKVFTRKKFWEVKSSIESAAAYNVVDRVVTSETVRMFESCGIPCRHIFCAMKNEHVKTIPSSLKLKRWTKSAKPDFMSSEPVVRRTKEEQKDDERQKLKTMNLRGRVMVPWEMINQRGSADTSKGKRRCVSPPSQTSFDRAELQGLHDKVGERQAKQSRRSNGKQKNKGVDGAGEEMKFGPGKMGPGAGVNNVNMLPTSLFPHFPSTSMYPPPPCPRPPLYAPFYGYGSYGYYGQPQ 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi274g00017 570 MobiDBLite consensus disorder prediction 413 429 - -
Sebi274g00017 570 MobiDBLite consensus disorder prediction 475 506 - -
Sebi274g00017 570 Coils Coil 417 437 - -
Sebi274g00017 570 MobiDBLite consensus disorder prediction 409 429 - -
Sebi274g00017 570 PANTHER OS01G0519700 PROTEIN 367 434 - -
Sebi274g00017 570 Pfam FAR1 DNA-binding domain 69 159 IPR004330 -
Sebi274g00017 570 MobiDBLite consensus disorder prediction 443 519 - -
Sebi274g00017 570 MobiDBLite consensus disorder prediction 14 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi274g00017 Sebi-Chr274 914769 917570 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi274g00017 FAR1 6.4e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi274g00017 - - aip:107640898 244.202