Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi273g00043 ATGGTGATTCCTGATGAGAAGAATTCTAACTTGATCAACAACCCCACAAATTATCAAGGAGGGTTAGAATGTATGGGTACCAGAAAGGTTGGGCAGAACAGAAGAGCACTGAGCGCAATCAATCAGAATCTGGTGGAAGGTGGTAAACCTTATCCGTGTGTTGTTAACAAAAGGGCCTTGTCAGAAAAACATGATCTATGTGAAAAAAAGCAAGCGGATCCGGTGCATCGACCCATCACCAGGAGGTTTGCTGCACAAATTGCTAACACACAGCACTCTCATGTTGAGGAGACTAAAAAGTCAAACTTGGCAATTTCAAATTCCAATGGATTTGGAGAATTTATATTTATTGATGATGAACACAAGGAGGACCAACCTGTGCCCATGTCTTTAGAGCAAACAGAACCAATGCATAGTGAACCAGATCAGATGGAGGAGGTTGAAATGGAGGATATAGTGGTGGAAGAGCCTGTTTTGGACATTGATACCTGTGATGCAAATAATCCTCTTGCGGTCGTTGACTATATTGAAGATCTGTATTCCTACTATAGAAAAATGGAGAGTACTAGCTGCGTCTCACCAAATTATATGGCACAACAATTTGACATCAATGAAAGGATGAGGGCTATACTGATTGACTGGCTTATTGAGGTGCACGACAAATTTGACCTCATGCATGAGACATTGTTTCTAACAATTAATCTTATAGATAGATTTTTGGCTAAGCAATCAGTGGTAAGAAAGAAGCTTCAGTTGGTTGGTCTAGTTGCCATGCTTCTGGCATGCAAGTATGAGGAGGTTTCAGTACCTGTGGTTGGGGATCTGATTCTTATATCAGATAAAGCATACACAAGGAAAGAAGTTCTGGAAATGGAGAAATTGATGGTCAATACATTGCAATTTAACATGTCTGTGCCAACAGTTTATGTTTTCATGAAAAGGTTCCTAAAGGCAGCTCAAGCAGATAGAAAACTTGAGGCACTAGCATTCTTCTTGGTAGAGTTATCTCTAGTAGAATATGAGATGCTGAAGTTCCCTCCATCTCAGCTAGCAGCAGCTGCAGTCTACACAGCTCAATGCACTATCTATGGTTTCAAACAGTGGAGTAAGACATGTGAATGGCACACTAACTACTCAGAAGATCAACTATTAAAGTGCTCTAGTTTAATGGTTGATTTTCACCACAAGGCTGGGACAGGGAAACTGACAGGGGTGCATAGGAAGTACTGCTCATCTAAATTTAACTATACTGCAAAATGTGAACCAGCACGTTTTCTTCTGGAGAACCCATTGTAA 1296 0.4066 MVIPDEKNSNLINNPTNYQGGLECMGTRKVGQNRRALSAINQNLVEGGKPYPCVVNKRALSEKHDLCEKKQADPVHRPITRRFAAQIANTQHSHVEETKKSNLAISNSNGFGEFIFIDDEHKEDQPVPMSLEQTEPMHSEPDQMEEVEMEDIVVEEPVLDIDTCDANNPLAVVDYIEDLYSYYRKMESTSCVSPNYMAQQFDINERMRAILIDWLIEVHDKFDLMHETLFLTINLIDRFLAKQSVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDKAYTRKEVLEMEKLMVNTLQFNMSVPTVYVFMKRFLKAAQADRKLEALAFFLVELSLVEYEMLKFPPSQLAAAAVYTAQCTIYGFKQWSKTCEWHTNYSEDQLLKCSSLMVDFHHKAGTGKLTGVHRKYCSSKFNYTAKCEPARFLLENPL 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi273g00043 431 SMART Cyclin_C_2 306 423 IPR004367 -
Sebi273g00043 431 CDD CYCLIN_AtCycB-like_rpt2 306 422 - -
Sebi273g00043 431 SUPERFAMILY Cyclin-like 167 303 IPR036915 -
Sebi273g00043 431 PIRSF Cyclin_A_B_D_E 13 431 IPR046965 GO:0016538|GO:0044772
Sebi273g00043 431 Pfam Cyclin, C-terminal domain 306 421 IPR004367 -
Sebi273g00043 431 SMART cyclin_7 213 297 IPR013763 -
Sebi273g00043 431 SMART cyclin_7 310 392 IPR013763 -
Sebi273g00043 431 Gene3D - 178 418 - -
Sebi273g00043 431 CDD CYCLIN_AtCycB-like_rpt1 155 301 - -
Sebi273g00043 431 Gene3D - 192 304 - -
Sebi273g00043 431 FunFam G2/mitotic-specific cyclin-1 294 418 - -
Sebi273g00043 431 SUPERFAMILY Cyclin-like 305 423 IPR036915 -
Sebi273g00043 431 ProSitePatterns Cyclins signature. 208 239 IPR006671 -
Sebi273g00043 431 PANTHER CYCLINS 130 396 IPR039361 -
Sebi273g00043 431 Pfam Cyclin, N-terminal domain 178 304 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi273g00043 Sebi-Chr273 566959 570050 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi273g00043 1 427 Core Cell Cycle Gene Families AT1G20610 60.829 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi273g00043 K21777 - gmx:100798068 742.265