Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi273g00027 ATGCCGAAAGCCACCACTGATGCCAAAGCTGCCGATAACCGGTTGAAGCGCAAGGGCGCTGGAACAGGAAGGAAGCAGTCGAAGAAAGCTGCAAAGGATCCTAACAAGCCTAAGAGGCCTCCCAGCGCTTTCTTTGTTTTCATGTCTGAGTTCAGAGAACAGTTCAAGAAGGAGAATCCAAGCAACAAATCTGTCGCTGTGGTCGGTAAGGCTGGCGGTAACAGATGGAAAGCTATGTCCGATGCCGATAAGGCTCCTTACATTGCTAAGGCAGAAAAGAAGAAAGAGGAGTATGAAAAATCTCTTCGCGCCTACAATAATGGATTGGCTGAGGGCAAAAATCCCTCAGAGGAAGAAGGGTCTGACAAGTCAAAGTCTGAAGTCAATGATGATGAAGACGATGATGAGGATGACGACGAGTAA 423 0.4775 MPKATTDAKAADNRLKRKGAGTGRKQSKKAAKDPNKPKRPPSAFFVFMSEFREQFKKENPSNKSVAVVGKAGGNRWKAMSDADKAPYIAKAEKKKEEYEKSLRAYNNGLAEGKNPSEEEGSDKSKSEVNDDEDDDEDDDE 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi273g00027 140 MobiDBLite consensus disorder prediction 1 42 - -
Sebi273g00027 140 MobiDBLite consensus disorder prediction 93 140 - -
Sebi273g00027 140 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 5 137 IPR031061 -
Sebi273g00027 140 Pfam HMG (high mobility group) box 37 106 IPR009071 -
Sebi273g00027 140 Coils Coil 88 108 - -
Sebi273g00027 140 SMART hmgende2 36 107 IPR009071 -
Sebi273g00027 140 CDD HMG-box_AtHMGB1-like 38 87 - -
Sebi273g00027 140 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 37 106 IPR009071 -
Sebi273g00027 140 SUPERFAMILY HMG-box 24 106 IPR036910 -
Sebi273g00027 140 Gene3D High mobility group box domain 21 124 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi273g00027 Sebi-Chr273 305192 319791 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Sebi273g00027 HMG_box 7.9e-24 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi273g00027 K25507 - gmx:100499992 192.2