Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi273g00022 ATGGGAGGATTATTGCACTTTTTCGAATTCAATCAGGGGAGGATGGCCAAGAAAGTCCATGCTCATAAGAGACATCATGGCGGCTTGGAAGCTCCTCGAAATAGTGTAGATATGCAAGTAGAAACATCTCAGAACTTCTGTTCACAAGGAGAATTACCCTACTATTATCAAGTAGAGGAAGACGGGTCTGAGAATAATCATTATTCAAATGCGGGTTCAATGAAAAAATTGATCAATGAAGAGCTATCCAAACGATCAAGCACCAGACAAAATGCGCCAAGCCTTGTGGCAAGGTTGATGGGGATAGATATGATGCCATTAGACACTAAATCTGTTGCTCCCTCAGATAAAAGAGTAAGTGAAAATATTGGAAAGAAGTTTTCAAACAAGGGAATAAACGGAAGGGGTTCGGTTAGTTGGGAATCTTCCAACTTTAATTCTTCCAGTCAGATGGAATTTGATTCATTTTATGAAGACACAGATGATGATGATGGATGGAACCGGAGTTTTGGAGAACCAAGGCCACGAGAACATCCTCAAGAAGAGGAACTCCAAAAATTCAGGAAAGAGTTTGAAGCATATCAAGCAGCAAGGTTTCTGGAATGTTCTAAGGTTGCTGATATCGACAGTGTTTCTAGACGATTGCTTGTTCAGGAGAATCTGAACAAGGAAAAGTTGCCACATAATACAAGTTTACCGAGAGCAGCAACAGGGAAATTTGCAGGGCTTGACACCCCCTTATTCAAAACAGAACTACCTGACAGTGGTGGTTCAGAATATTGTGGTGATACGATGGAGTTAATCCCAGCTATGCAAAAGAAAACCTTTCCTTCAAAGAGCAGAACTCTAAGTAGAGACTTTGAGGAGTCCTTAATGATGAAATCTTATAACAGATTAGACATATGTTCTTCCCCCCCTCGGATAGTTATCTTGAAGCCTGGTCCTGACAGCATTTGCAACCATGAAGAGAATTGGACCAGTTCATCAGGCACTTTAACAGGGAGAAATAGTATAGAAGATTTTCTTGAGGAGGTGAAAGAGCGTTTGAAATCTGAACTGCAAGGAAAAACTGTCAAAAAGGGTTCTGTGGTTCGAGGAAGTGAAATTGAGACACTTTACAATAAAAAACCATCTGATCCTAAACTTATAGCCCGTCATATAGTGAAGCAAGTCAGAGAAAGTGTGACTAGAGATACTGACACAAATATGGTCCGCTCAGAATCAACAAGAACATACAAAAGTGAAATGCAGTTCAATGGACCAAGTTTCCCAGAATTTATCAGTAGAGATACCAGGAGGTTCTTGTCAGAGAGGCTAAGTAATATTGTGAAAAGTGAAAGACATGATGACATTCCTGATAGGAACTCAAGATCACATTCATTAGACAATCACAGAGTTAGACTCAAGCAGACAGGGGATATTATGAAGTGTGCAAATGAAAGGGAAATTTCAAAAGAGGAAACAGAAATACAAACAGGATCTTTCAGGCATGAATTAGATGACAATATATTGCTCCAGAGGGAGTTGTCTCCCAGGAACCTTGTAAGATCCTTGTCTGCTCCTGTATCAGTATCAGGAACATCATTTGGGAAGCTTCTTCTAGAGGACCGCCACATTTTAACTGGTGCTCATATTAGGAGGAAGCTTGAAGCCGTTGAAACTATGTCTGTTGGTGTTAAAAAACGGAAAAAAGATAGATTTAATATTAGAGAAAGGGTCTCCAATTTTAGATATAGTCTTGCTCTAAGAGGGAAGCTTTTTGGCAAAAGGAGTCAATCAATGGTAGAATCACATGGCAATGAATATGGTCCTGTGGTGAGTGATGTCACAAGTGGACCAACAGTTCTTATGAACTATGGTGAGAGGCATGAGAACTCCACTGAAGTACCTCCAAGTCCTGCATCTGTATGCAGCAGTGTTCATGAAGACTTTTGGAGGCGGACTGAATATTTAAGTCCAATATCAACCCCTGATGTGCCTTCAAGAGACGATATTGTTGTGCCCCAGGAGCCCGTTGAGTCTGGATTAGTTCAATTAGAGGATCCAGCAGAATCTTACATAAGAGATCTACTTGTTGCTTCTGGTCTGTACTTTGGTTCATGGGATAAATCCTTATTAAGAGGGGATACATTTGCAAAGCCTATTGGCAACTCTGTTTTTGAAGAAGTGGAAGAATCTCATAAGAAATTAGTCAAGGAGAATGATGAAAGACCTATAAAGGATCAGAATGAGAATAAGCTAGACCACAAGATTTTGCTTGATTTGTTAAATGAGGCACTTTCAGTTGTTCTTGGACCACCTTTGACATTGACTAGATTCAGAAGGAAATTAAGCAACTCTTCCATGTTGCCACCACCTTGTGGGAAGGAACTGTTGAACTCAGTATGGGACATTATCCGTGTTTCTTTATATCCTCCATCTGACATATCTTCTTATTCACTTGATGGTTTGGTGGCTCAACACTTGAGATGCATCCCCTGGTCCGGATTAATAAATGATGAGATCAATATATTGGAAAGAGAGATAGAATGTCTTATAACTAATGATCTAATTGAAGAACTCACAAAGGACATGCTCTAA 2580 0.3992 MGGLLHFFEFNQGRMAKKVHAHKRHHGGLEAPRNSVDMQVETSQNFCSQGELPYYYQVEEDGSENNHYSNAGSMKKLINEELSKRSSTRQNAPSLVARLMGIDMMPLDTKSVAPSDKRVSENIGKKFSNKGINGRGSVSWESSNFNSSSQMEFDSFYEDTDDDDGWNRSFGEPRPREHPQEEELQKFRKEFEAYQAARFLECSKVADIDSVSRRLLVQENLNKEKLPHNTSLPRAATGKFAGLDTPLFKTELPDSGGSEYCGDTMELIPAMQKKTFPSKSRTLSRDFEESLMMKSYNRLDICSSPPRIVILKPGPDSICNHEENWTSSSGTLTGRNSIEDFLEEVKERLKSELQGKTVKKGSVVRGSEIETLYNKKPSDPKLIARHIVKQVRESVTRDTDTNMVRSESTRTYKSEMQFNGPSFPEFISRDTRRFLSERLSNIVKSERHDDIPDRNSRSHSLDNHRVRLKQTGDIMKCANEREISKEETEIQTGSFRHELDDNILLQRELSPRNLVRSLSAPVSVSGTSFGKLLLEDRHILTGAHIRRKLEAVETMSVGVKKRKKDRFNIRERVSNFRYSLALRGKLFGKRSQSMVESHGNEYGPVVSDVTSGPTVLMNYGERHENSTEVPPSPASVCSSVHEDFWRRTEYLSPISTPDVPSRDDIVVPQEPVESGLVQLEDPAESYIRDLLVASGLYFGSWDKSLLRGDTFAKPIGNSVFEEVEESHKKLVKENDERPIKDQNENKLDHKILLDLLNEALSVVLGPPLTLTRFRRKLSNSSMLPPPCGKELLNSVWDIIRVSLYPPSDISSYSLDGLVAQHLRCIPWSGLINDEINILEREIECLITNDLIEELTKDML 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi273g00022 859 Pfam DUF761-associated sequence motif 90 106 IPR032795 -
Sebi273g00022 859 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 670 - -
Sebi273g00022 859 MobiDBLite consensus disorder prediction 162 181 - -
Sebi273g00022 859 Pfam Domain of unknown function (DUF4378) 685 853 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi273g00022 Sebi-Chr273 262373 266768 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi273g00022 74 858 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 38.935 2.11e-139 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi273g00022 - - gmx:100779720 1317.75