Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi273g00016 ATGGCCCAAGGGACTGATTGCACCTCTCAGACAGTTGTGATGCCTGGTGGTGGGTGCCCCAAAGGGGCTAATAGTGAGTGTTCCATGGAGGATCAGAATGGTGATACTGTGGGAAATTTGAATCAGAATATTGGGAAACCTCCAAGGGATCATTCGGTTATGCGCCATTGTAGCAGCTCTTCATGGTTAGCTGAATCGGATCCAAATATTAATTCTATTGGCCAAAAATCAAGCACTGAGGAAAAATCAGAGTTCTCGATTGTATTGCGATCTGGAAGCTGTTCTGAAAAAGGACCAAAGCAGTACATGGAGGATGAGTTCATATGTGTTGATATTCTTAATGAATGTGTTGGTCCAGAAGCAGACCTTTCTTCTCCAGCAGCATTTTACGGGGTATTTGATGGACATGGTGGTGTTGATGCAGCATCATTTACCAGAAAGAACATCCTTAAGTTTATAATTGAAGATTCTCATTTCCCATCTGGGATTAAGAAAGCAGTTAAAAGTGCATTTATAAAGGTTGATCATGCATTAAGAGATGCTAGTGCTCTTGATAGTTCTTCAGGCACCACTGCTCTAGTAGCCCTTGTGCTGGGAAGGGACATGCTAATTGCCAATGCAGGGGATTCTCGTGCTGTATTGGGCAAACGGGGCAGAGCCATTGAACTTTCTAAAGACCATAAACCAAATTGCACTTCTGAGAGATTAAGAATTGAGAAACTGGGTGGTGTCATCTATGATGGATACCTCAATGGCCAACTATCAGTGGCTAGAGCTCTTGGAGATTGGCACATCAAAGGTTCTAAAGGTTCTAAAAGCCCTTTAAGCTCTGAGCCTGAGCTAGAGGAGATTGTGCTGACAGAAGAGGATGAGTTTTTGATAATGGGTTGTGATGGATTATGGGATGTGATGAGTAGCCAGTGTGCTGTTACAATGGTAAGGAGGGAGCTTATGCAGCATAATGATCCCACAAAATGTGCAAAAGTACTTGTTACTGAGGCACTCCAACGCAACACATGTGACAATCTGACAGTTGTGGTGGTTTGTTTCTCCAAAGATCCACCACCAAAAATTGAAATTCCTAGATCACATAGGAGAAGGAGTATTTCTGCTGAAGGCCTTGATCTTCTCAAGGGTGTCTTGAATGGTAGATGA 1155 0.4303 MAQGTDCTSQTVVMPGGGCPKGANSECSMEDQNGDTVGNLNQNIGKPPRDHSVMRHCSSSSWLAESDPNINSIGQKSSTEEKSEFSIVLRSGSCSEKGPKQYMEDEFICVDILNECVGPEADLSSPAAFYGVFDGHGGVDAASFTRKNILKFIIEDSHFPSGIKKAVKSAFIKVDHALRDASALDSSSGTTALVALVLGRDMLIANAGDSRAVLGKRGRAIELSKDHKPNCTSERLRIEKLGGVIYDGYLNGQLSVARALGDWHIKGSKGSKSPLSSEPELEEIVLTEEDEFLIMGCDGLWDVMSSQCAVTMVRRELMQHNDPTKCAKVLVTEALQRNTCDNLTVVVVCFSKDPPPKIEIPRSHRRRSISAEGLDLLKGVLNGR 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi273g00016 384 PANTHER PROTEIN PHOSPHATASE 2C 75 348 IPR015655 GO:0004722|GO:0006470
Sebi273g00016 384 SUPERFAMILY PP2C-like 84 351 IPR036457 -
Sebi273g00016 384 ProSiteProfiles PPM-type phosphatase domain profile. 90 350 IPR001932 -
Sebi273g00016 384 Pfam Protein phosphatase 2C 91 342 IPR001932 -
Sebi273g00016 384 CDD PP2Cc 90 350 IPR001932 -
Sebi273g00016 384 Gene3D - 71 354 IPR036457 -
Sebi273g00016 384 ProSitePatterns PPM-type phosphatase domain signature. 129 137 IPR000222 GO:0043169
Sebi273g00016 384 MobiDBLite consensus disorder prediction 24 61 - -
Sebi273g00016 384 FunFam Probable protein phosphatase 2C 22 75 353 - -
Sebi273g00016 384 SMART PP2C_4 80 348 IPR001932 -
Sebi273g00016 384 MobiDBLite consensus disorder prediction 26 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi273g00016 Sebi-Chr273 210428 212714 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi273g00016 73 382 PP2C-type Phosphatase Gene Family AT3G51470 79.355 0.0 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi273g00016 K14803 - gmx:100786416 625.55