Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi272g00089 ATGGAAGACAAAAAGAATAACGACATGAACATTGGAGAGTTTTCGGCTTTCTCTGCCAAACGGAGAACTAATAGCGGGAGAATCAATTTCGATTTGAATGAAGAGCCTCCTCCTTCTCCTATACATATCATGCTTCCTAGTTCTCACTCTCAGGTTTCTGCTGATGGTTGCCACATGGCGATGGGAGGGTTTATAGACTTGGAGGAACCTAATCATGAATTTTCATTCTCCACTAAAGGAGATGCTACAGGAGATATCAATGAATACAGTGATGCGAAACTGGTGAAGGATGCAACTATTGATGTTGGTAATAATAAGGGTAAGGGTAAGATGCCAATGTATTGTTCCGAGTCTCCAATAAGGGTAAGAGAAAAGGATGCAAATGTGAATGAGGTCTCCAATAATCCTCCTTTATCAACTGATGGTGGCAACTTCAAAACTCTTTCTTCGTTTGAGGTGGAGGTTGTTCCAGATCCTTCTTTTACACCTGCTAGCCAAAATGGCAATGATGAAGATAACGGAGTTACTGAAGGAAACATATCACTTCAAGAGGAGAATGTTGTTGTTGATGTTGCTGCTGTCCAACTTGAGAGCCGAATGGACATACCGGATGATGGTTATCGCTGGCGTAAGTATGGACGCCAGAAAATCAAAGGAGGTTACCTTAGGAGCTATTACATGTGCTCGAATAATGGGTGTAGTGTAAGGAAACAGGTGGAAAGGGATTTAAGTAATTCAGGATGTGTAATTAAAACAACATATGATGGAAGGCATAATCATGAAGTGCCAATTAGCGGCGTTAGAATCATTAACCCACCCAAAATTAAGCCAAGACCCCGAACTATTAGGGAAGAGATTGAAGCTGCTAATGCAATGGTCACTTTTGCAATACCACCTGAGACTACTGCAAGGCTGCCTAGGCCTACACCTCCTCCACTTCATCCTGCAGGCAACAATTGCCATGGAGGAGGACTGAATCCTAATAACCGTTATGGTAATAATACTCCTCCGCAAGGTGGATCCACCTCATGA 1032 0.4254 MEDKKNNDMNIGEFSAFSAKRRTNSGRINFDLNEEPPPSPIHIMLPSSHSQVSADGCHMAMGGFIDLEEPNHEFSFSTKGDATGDINEYSDAKLVKDATIDVGNNKGKGKMPMYCSESPIRVREKDANVNEVSNNPPLSTDGGNFKTLSSFEVEVVPDPSFTPASQNGNDEDNGVTEGNISLQEENVVVDVAAVQLESRMDIPDDGYRWRKYGRQKIKGGYLRSYYMCSNNGCSVRKQVERDLSNSGCVIKTTYDGRHNHEVPISGVRIINPPKIKPRPRTIREEIEAANAMVTFAIPPETTARLPRPTPPPLHPAGNNCHGGGLNPNNRYGNNTPPQGGSTS 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi272g00089 343 MobiDBLite consensus disorder prediction 157 179 - -
Sebi272g00089 343 MobiDBLite consensus disorder prediction 160 179 - -
Sebi272g00089 343 ProSiteProfiles WRKY domain profile. 198 263 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi272g00089 343 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 144 266 IPR044810 GO:0003700
Sebi272g00089 343 SUPERFAMILY WRKY DNA-binding domain 197 263 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi272g00089 343 SMART WRKY_cls 203 262 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi272g00089 343 MobiDBLite consensus disorder prediction 305 343 - -
Sebi272g00089 343 Pfam WRKY DNA -binding domain 204 261 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi272g00089 343 Gene3D WRKY domain 188 264 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi272g00089 343 MobiDBLite consensus disorder prediction 322 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi272g00089 Sebi-Chr272 1279510 1281732 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi272g00089 189 268 WRKY Transcription Factor Family AT5G07100 39.506 8.07e-11 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi272g00089 WRKY 6.1e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi272g00089 K18835 - mof:131154508 106.686