Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi272g00084 ATGGAAGACAAAAAGAATAACGACACGAACATTGGAGAGTTTTCGGCTTTCTCTGCCAAACGGAGAACTAATAACGGGAGAATCAATTTCGATTTGAATGAAGAGCCTCCTCCTTCTCCTATACATATCATGCTTCCTAATTCTCACTCTCAGGTTTCTGCTAATGGTTGCCACATGGCAACGGGAGGGTTTATGGACCTGGATGAACCTAATCATGAATTTTCATCCTCCACTGAAGGAGATGCTACAAAAGATAGCGATGAACACAGTGGTGCGAAAGTGGTGAAGGATGCAACTATTGATGTTGGAGAAAAGGATGCAACAAACAACATAGAATCGAAGGGTAATGGTTGGGAAGTGACACCCTCTGAATTTTCTATTGTGAATGTGAATGAGGTCTCTAATACTCCTCCTTTATCAACTGATGGTGGCAATTTCAAAACTCTGTGTTCGTTTGATGAGGTGGAGGTCATTCCAGATCCTTCTTTTACACCTGCTGGCCAACATGGTGATGAAGAAGGTAACGGAGTTACTGAAGGAAACATATCACTTCAAGATGAGGAGAATGTTGTTGCTGATACTGCTGATGATGAGGAGTCTAAAAGGAAGAGGAAGAGAGAGAGCAACCTTGTGATGAAATACAACAAGAGGCCGAGGAGGAAGATTGATCAAAGAGTAGTAGTCCAACTTGAGAGCCGCATGGACATACTGGATGATGGTTATCGCTGGCATAAGTATGGACGCAAGAATATCAAAGGAAGTCCATACCTTAGGAGCTACTACAGGTGCTCGAATAATGGATGTAGTGCAAGGAAACAGGTGCAAAGGGATGTAAATAATTCAAGATGTGTAAAAACAACATATGATGGAAGGCATAATCATGGAGTGCCAAGCAACGCAAGAATCATTAACCCACCCATAATTAAGCCAAAACCCCAAACTATTAGGGAAGAGATTGAAGCTGCTAATGTGATGGTCACTTTTGCAATACCACCTGGGACTACTGCAAGGCTGCCTAGGCCTACACAAACTTCTCCTCCACCTCATCCTAATCACAACACATTTCTGAGGCGCAATTTGGTTGAAAATATCAATTATAATCATCATGGTGATGGATCTTCTTCCTCTGCATACCAAATGCTCCATTCTTATCGTGGTTCCAATGAAGGAGGGTTGAATCCTAATAACCGTTATTGTAATAGTAATGCCCCTTTGCAAGGTGGATTCGGTCCCTCATCAATGCTTCCTGGTTTTCGTCCATTTAATTATATTCCACCCGATCAACAGGGTAGAGTTCATAACAATGGGACCGGTTCAGTTTTTCCCTTTAGAGCAAAACCTGCTGAAGGTGATCACTGGAATGGATGA 1368 0.4232 MEDKKNNDTNIGEFSAFSAKRRTNNGRINFDLNEEPPPSPIHIMLPNSHSQVSANGCHMATGGFMDLDEPNHEFSSSTEGDATKDSDEHSGAKVVKDATIDVGEKDATNNIESKGNGWEVTPSEFSIVNVNEVSNTPPLSTDGGNFKTLCSFDEVEVIPDPSFTPAGQHGDEEGNGVTEGNISLQDEENVVADTADDEESKRKRKRESNLVMKYNKRPRRKIDQRVVVQLESRMDILDDGYRWHKYGRKNIKGSPYLRSYYRCSNNGCSARKQVQRDVNNSRCVKTTYDGRHNHGVPSNARIINPPIIKPKPQTIREEIEAANVMVTFAIPPGTTARLPRPTQTSPPPHPNHNTFLRRNLVENINYNHHGDGSSSSAYQMLHSYRGSNEGGLNPNNRYCNSNAPLQGGFGPSSMLPGFRPFNYIPPDQQGRVHNNGTGSVFPFRAKPAEGDHWNG 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi272g00084 455 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 113 337 IPR044810 GO:0003700
Sebi272g00084 455 MobiDBLite consensus disorder prediction 72 96 - -
Sebi272g00084 455 Pfam WRKY DNA -binding domain 238 294 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi272g00084 455 SMART WRKY_cls 237 296 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi272g00084 455 MobiDBLite consensus disorder prediction 162 183 - -
Sebi272g00084 455 MobiDBLite consensus disorder prediction 1 38 - -
Sebi272g00084 455 MobiDBLite consensus disorder prediction 68 96 - -
Sebi272g00084 455 ProSiteProfiles WRKY domain profile. 232 297 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi272g00084 455 MobiDBLite consensus disorder prediction 10 30 - -
Sebi272g00084 455 Gene3D WRKY domain 222 298 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi272g00084 455 SUPERFAMILY WRKY DNA-binding domain 231 297 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi272g00084 Sebi-Chr272 1256789 1259818 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi272g00084 171 298 WRKY Transcription Factor Family AT5G56270 42.969 1.92e-25 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi272g00084 WRKY 4.9e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi272g00084 K18835 - qsa:O6P43_007761 155.606