Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi272g00082 ATGCCAGGAATCAAGCATGGTGCTAAATCGGTGATCAATTTTAAGGGTTACCTGATTGGAAATGGTGCGACGGACAAAAGGTTTGACGGCAATGCTCTCATCCCATTTGTACATGGAATGGGTCTCATATCAGACGATATCTATGAGGATGTAAAAGCTGCTTGCAAAGGAAAGTACTACGATTCTAAATACGCTGCGTGCACAAAGAACCTCGACAAAGTTTACAAGATTCTTGAGGGGCTTAACGTGTACTATACAATAGATTCATGTTACCATGACCCTCCTGCTACTGCTGCTGCCGCCGCCAAAGGAAATGGAAGCTTGCCATTGAGTTTCCAGCAATTAGGAACTACCGATAAGGCTCTTCCTGTGAGAAAGAGAATGTTTGGTCGAGCTTGGCCCCTTCGAACACACTTTGTTTCATCATGTGGCCCTCACTGGCTGCAGATAGCATTGGATGTGATGATAAATTACACTTTCGATGTTGGAAGCAATATGATTCCTTACCACAAGAAACTAACCAAGGAGCTGGGCTATCGAGCACTTATTTTCAGTGGCGACCATGATATGTGTGTGCCATTTACGGGAAGTGAGGCGTGGACTCGATCTCTGAGATATAAGGTTGTGGATGAATGGAGGCCTTGGTTCACGGATGGTGTAGTTGCTGGGTTCTTGCAAGCATACGAACACCATCTTACCTTTCTCACCATCAAGGGAGCTGGACACACTGTCCCTGAATATAAGCCGCGGGAGGCACTGCATTTTTATAGCCGATGGTTGGAAGGAAAACGAATATAA 798 0.4536 MPGIKHGAKSVINFKGYLIGNGATDKRFDGNALIPFVHGMGLISDDIYEDVKAACKGKYYDSKYAACTKNLDKVYKILEGLNVYYTIDSCYHDPPATAAAAAKGNGSLPLSFQQLGTTDKALPVRKRMFGRAWPLRTHFVSSCGPHWLQIALDVMINYTFDVGSNMIPYHKKLTKELGYRALIFSGDHDMCVPFTGSEAWTRSLRYKVVDEWRPWFTDGVVAGFLQAYEHHLTFLTIKGAGHTVPEYKPREALHFYSRWLEGKRI 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi272g00082 265 FunFam Carboxypeptidase 166 262 - -
Sebi272g00082 265 ProSitePatterns Serine carboxypeptidases, histidine active site. 232 249 IPR033124 GO:0004185
Sebi272g00082 265 Gene3D - 118 264 - -
Sebi272g00082 265 FunFam Carboxypeptidase 136 265 - -
Sebi272g00082 265 Pfam Serine carboxypeptidase 4 262 IPR001563 GO:0004185|GO:0006508
Sebi272g00082 265 SUPERFAMILY alpha/beta-Hydrolases 10 263 IPR029058 -
Sebi272g00082 265 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 10 249 IPR001563 GO:0004185|GO:0006508
Sebi272g00082 265 Gene3D alpha/beta hydrolase 4 101 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi272g00082 Sebi-Chr272 1224057 1226489 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi272g00082 150 263 Calmodulin-binding Proteins AT2G22960 47.368 1.89e-31 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi272g00082 K16296 - gmx:100790895 338.961