Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi272g00069 ATGAAAGGGCGATCCCACCGCCCTCAGAGTACGGACCCACCGGACGATTGGGTCGACGGTTCATGGACCGTCGACTGCATTTGCGGCGTGACCTTCGACGACGGTGAAGAGATGGTTAAATGCGACGAGTGCGGCGTTTGGGTTCACACGCGCTGCTCTCGTTACGTCAAGGGAGACGACATGTTCGCCTGTGACAAGTGCAAGAACAAGACCAACGGCCGAGCTGACAACAACACCGAGGAAACCGAGGTTGCTCAATTGCTGGTTGAGCTCCCAACAAAAACCATTTCTTTGGAGAACAACAACAATTCTTTCGCGTCCAAAGTCGCCGCTCGTTCTCGCCGCCCTTTCAAGCTTTGGACCGATATACCCATGGAGGAGAGGGTTCACGTTCAGGGTATCCCTGGTGGTGATCCTTCTCTCTTTGCTGGAAGGACTGTGCCCTCGATTTTCAGTCCCCAATTGTGGAAATGCACCGAGGGTGCAGCACAAGAGAATGATAATGGAGCTGGGGTTCTTTTCTCCTTTTCTAAAGAAACCAGTGCTACTGCTGTCTTGGCTTCCCCTGTTGCTGCTCTGGTTGATATGAGATCTAGCCACGGCCGTGAAGGCAAGACGGGTTTCAAGGATATGGGGATGAACAAGTTTGGCGGGGAAGATGGGACACGTGTCCATAATGCGATAAAGAAGGAGAGGAGTTTGCTGAGGCCTCTTGTTGTTCATTCCAGTAAGCGCAGGAAAGAGGACTTGGGGAACTCCAATTCCAAAGACCGGAGTGGGAAGAAGCGGGTTAAGATCTCTTCTGACAAAGAGGTAGATCCCAAGAGGAGGAGTTCACATTCTTCTAAACCAGCGTTTACACCCACCAGTGATGCAAAACAGTTGGAATTTTATGAAGACAGAGGTCCGAAGATTTTCAAGGCTGACACTCGGAGCATAAAGAATAAAAACTTAAAGGACATAGTGGTTCAAGAACATGTTTCTAATGATTATTTTGCTGTGGATACCATCGCGGAGGAGCCAAATAACAACTTGACAACTACTGAGGAGTCTTCAGAAGCCTTATATCCTAACATAACAAGACACAGTCTTTCTGTTGGTGATGTATTAGCAGATGAGAAGACTGGCCATAAACTTGTTGAAATGTCTTCTAAGACTGATGATGCCGTTACATCAATTCTAAACCATAATAAAGTTGGAAATGCTTCAGTTAAAGAAAAGGACGGAGATTGCTTGGCTGCTGATAATGTGGATGATACTTTAGTAGCAAGAAGCACTGTGAGTCCTCAGACGGAAGATCATTGTGGTTCTGCACCAGAACTGAAGGATAACCAAGCATCTCAAGATCTTGACTGTAATCTGCGTCCTAGCTCTGCAAAATGCAAAGTTAAGGTGAAGAAAGAAGATGATGATGATGATTTTAAGAAGCTCTCCAATTTTCATTCTTCACCTATCAGTGATCTTAAAAACAATGAAAAGCCATCTGATCATGCATCTGATATTGTTAAAGTGAATGATGTTGTGGTTCCCAGTTTATCATCCCGTGAAAATAAAATGGGCGATGTTGACATATCATCAAAAGTAGTCCCTGATGATCATACCAATAAACCTGATGAATTATTATCTGGCAATTTTTGTCATGGAAAACAAGAAGTGGAGGGGTCTGAAGGTTCATTGGAAACACAAAAGGGGTTTTCAGAAACAAAAGATGGTTCGGATTCTGCTAAGGATCCATCAAAATCTGAAGCACCTGGATGTCCTCATAAGATGCTAGCATGTGTTGGAAAGTCATCTCCAACTTCATCAACCATGAACTCCAAATCATTGAGTCATGACTTCAAATCTGAAGATACTGAAATCCCTAATTCTTTTACAAAGCATGGACTGATGTCTGATTGTAACATTCACATAAAGAATGAAAGTTGTCCGAGTGATGTTGCAAAGGATGAAATTCCAAGGAAGTCTGTAAGAGACCGACCCAAATCTTCGAATTCCAATTCAAAAGGATTACATTCAAGCAGGAGTGCGCAAATTTCTGTTTCAAAGCAAGTAAATTCAGATGCTAGAGATTCTGTTCATTGTTCGTCATCTAAAGTGTCTTTGGCACATCAGACTGCAAGTACTTTAGGCGCTAGTGAGACTAATGCATCACTGCATCACCAGAAGGCTTTACAAATGCAGAATAAGGTTACATCTTCAGTGCCACAGAAAGTTGAAAAGCTTAACCAAACAAGCACCCATCCTTCCTCTAAGTTGAACCAGAGTAACGTGCCAACAGTGAATCCTTCTCCAACATCAAATTCTTCAATGCTGAGTGATGAAGAGCTTGCTTTGCTATTGCATCAAGAACTGAATAGTTCACCTCGTGTGCCTCGGGTACCCCGTGCACGCCATGCAGGTAGCTTGCCACAGTTAACTTCTGCTAGTGCTACAAGCATGCTAATGAAGCGAACAACATCGGTTGGAGGAAAGGATCACTATTTGGTGTCTAGACGAAAGTACAAGGATGCATCTAGAGATGGGTTTGGCAGTTCTCGTGAGCCTGAAGATGAAGCTAAAAAGATAGAGAAGGAGAAGGGTCCATCCACATCTGATCAGAGAAAACAAGATATTGCGTATGTAGAAGATGCTGCTGCAAAGGAAGAAGGAGAGCGTGCATCTGTGACAGCTGCAATCACAAACAATGTTGTTTCTGCCACCTCTGCCATTGCAAACAGCAGTCCTTCCTCTCCTCCTGATGATCAGAATCTGTCATCAATACGGAACTCACCCAGGAATATATCTGATGATGATACAGCAACTGCTGGAAGGCCAGTTCATCACACCTTACCTGGCTTAATCAATGATATTATGAGCAAGGGCAGGCGTATGACATATGAGGAACTCTGTAATGCTGTGCTACCGCACTGGCACAACTTGAGGAAGCATAACGGAGAGCGTTATGCATACTCGAGTCACTCTCAGGCTGTTCTTGATTGTTTGAGGAACCGGAATGAATGGGCAAGGTTGGTTGATCGTGGTCCAAAGACAAATTCTAATAGGAAAAGGCGTAAGCTGGATGCTGATGAATCTGATGATAATGGATATGGCAAGGGAAGAAATTCCAAAGAGGCTGACGGGAAGAACTTTGAGTTGCAAAAAGAAGAGTTCCCTAAAGGCAAGCGTAAAGCTCGAAAACGCAGGCGCCTTGCTCTCCAGGGAAGAGCGGTAAAGGATGTCAGGAGGAGACAAAAAGCTGACTCGCTAACTGATGAGGATGTTGGTCCATTCTCCAATTCTAGTGAAGAAAGCATGTTTAGTGAGGATGAAATTCAAGTTGGCAGAATATGTGCAGCAGGAAGTACATCTGATGAGGCAGTGAGCTCAATGTCTCCTGTGTTTGTGAGCTTGTCTGGTGGGGAGTTGGATTGCCGGTATTTGGTGTGA 3426 0.4448 MKGRSHRPQSTDPPDDWVDGSWTVDCICGVTFDDGEEMVKCDECGVWVHTRCSRYVKGDDMFACDKCKNKTNGRADNNTEETEVAQLLVELPTKTISLENNNNSFASKVAARSRRPFKLWTDIPMEERVHVQGIPGGDPSLFAGRTVPSIFSPQLWKCTEGAAQENDNGAGVLFSFSKETSATAVLASPVAALVDMRSSHGREGKTGFKDMGMNKFGGEDGTRVHNAIKKERSLLRPLVVHSSKRRKEDLGNSNSKDRSGKKRVKISSDKEVDPKRRSSHSSKPAFTPTSDAKQLEFYEDRGPKIFKADTRSIKNKNLKDIVVQEHVSNDYFAVDTIAEEPNNNLTTTEESSEALYPNITRHSLSVGDVLADEKTGHKLVEMSSKTDDAVTSILNHNKVGNASVKEKDGDCLAADNVDDTLVARSTVSPQTEDHCGSAPELKDNQASQDLDCNLRPSSAKCKVKVKKEDDDDDFKKLSNFHSSPISDLKNNEKPSDHASDIVKVNDVVVPSLSSRENKMGDVDISSKVVPDDHTNKPDELLSGNFCHGKQEVEGSEGSLETQKGFSETKDGSDSAKDPSKSEAPGCPHKMLACVGKSSPTSSTMNSKSLSHDFKSEDTEIPNSFTKHGLMSDCNIHIKNESCPSDVAKDEIPRKSVRDRPKSSNSNSKGLHSSRSAQISVSKQVNSDARDSVHCSSSKVSLAHQTASTLGASETNASLHHQKALQMQNKVTSSVPQKVEKLNQTSTHPSSKLNQSNVPTVNPSPTSNSSMLSDEELALLLHQELNSSPRVPRVPRARHAGSLPQLTSASATSMLMKRTTSVGGKDHYLVSRRKYKDASRDGFGSSREPEDEAKKIEKEKGPSTSDQRKQDIAYVEDAAAKEEGERASVTAAITNNVVSATSAIANSSPSSPPDDQNLSSIRNSPRNISDDDTATAGRPVHHTLPGLINDIMSKGRRMTYEELCNAVLPHWHNLRKHNGERYAYSSHSQAVLDCLRNRNEWARLVDRGPKTNSNRKRRKLDADESDDNGYGKGRNSKEADGKNFELQKEEFPKGKRKARKRRRLALQGRAVKDVRRRQKADSLTDEDVGPFSNSSEESMFSEDEIQVGRICAAGSTSDEAVSSMSPVFVSLSGGELDCRYLV 1141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi272g00069 1141 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 14 75 IPR013083 -
Sebi272g00069 1141 MobiDBLite consensus disorder prediction 199 221 - -
Sebi272g00069 1141 MobiDBLite consensus disorder prediction 478 626 - -
Sebi272g00069 1141 MobiDBLite consensus disorder prediction 235 294 - -
Sebi272g00069 1141 MobiDBLite consensus disorder prediction 662 692 - -
Sebi272g00069 1141 MobiDBLite consensus disorder prediction 1004 1098 - -
Sebi272g00069 1141 MobiDBLite consensus disorder prediction 639 692 - -
Sebi272g00069 1141 MobiDBLite consensus disorder prediction 741 769 - -
Sebi272g00069 1141 MobiDBLite consensus disorder prediction 802 818 - -
Sebi272g00069 1141 SMART PHD_3 25 68 IPR001965 -
Sebi272g00069 1141 MobiDBLite consensus disorder prediction 595 609 - -
Sebi272g00069 1141 MobiDBLite consensus disorder prediction 428 451 - -
Sebi272g00069 1141 MobiDBLite consensus disorder prediction 1004 1052 - -
Sebi272g00069 1141 ProSitePatterns Zinc finger PHD-type signature. 26 67 IPR019786 -
Sebi272g00069 1141 PANTHER UNCHARACTERIZED 1 1114 - -
Sebi272g00069 1141 MobiDBLite consensus disorder prediction 235 280 - -
Sebi272g00069 1141 MobiDBLite consensus disorder prediction 1066 1083 - -
Sebi272g00069 1141 MobiDBLite consensus disorder prediction 826 869 - -
Sebi272g00069 1141 MobiDBLite consensus disorder prediction 642 661 - -
Sebi272g00069 1141 MobiDBLite consensus disorder prediction 787 869 - -
Sebi272g00069 1141 MobiDBLite consensus disorder prediction 902 930 - -
Sebi272g00069 1141 MobiDBLite consensus disorder prediction 902 940 - -
Sebi272g00069 1141 MobiDBLite consensus disorder prediction 520 538 - -
Sebi272g00069 1141 SUPERFAMILY FYVE/PHD zinc finger 14 72 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi272g00069 Sebi-Chr272 968093 975845 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi272g00069 24 67 PHD Transcription Factor Family AT5G22260 44.681 2.82e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi272g00069 - - gmx:100810855 1553.88