Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi272g00060 ATGGCCAATCTTTTAAGCCATAAGTGGTTCTTGGTGTCTCTTTTGATTACATTGCTCCAAATCCAAACCAAGGTGCTCTGCTACCAATACAAAGTTGGAGATCTAGATTCTTGGGGGATACCCACCTCATCAAATCCACAAGTCTATGCCAAATGGTCCAAATATCACAATCTCACGCTTGGAGACTCACTTTTGTTTCTATACCCACCAAGTCAAGATTCAGTGATTCAAGTAACAGAGGAATCCTACAAGAGCTGCAACCTTAAAAACCCCATATCGTATATGAACAATGGAAACTCTTTGTTTAACATTACATCACATGGGGACTTCTACTTCACCAGTGGAGAGCCTGGTCATTGCCAAAAGAATCAGAAGCTTCATATATCTGTGGGTGGAGGAGGAGGAAAGGAAAATGTGAATGCAGCACCTGGTCCAAGTTCATTGTCTGCATATGCACCTTCTTATCCCACAGTATTTGGCAACATTCCAATTTCTCCTTCTTCTTCAGCCTCACCTAAGCTAACTTCAACTTTTCAAGTCCTCACCATTGGATCTGTGATATGTGCACTGTTCTATGCCTTAATAAATCATGTTGCCCTTCATGATGATGTGATTTCAAAAGCTTTTCAGGGAAGAAATGGAAGAGCTTTTCTGTTCTCCCATGCAATGAACATTACAGTAGGGCCAAAAGAAGACAGGGAACTCATGACAGGTCTCCACACAATTGCTGATGTGTACTGTTCAGACTGCCATAAGGTGCTTGGTTGGAAGTATGAGAGAGCTTATGAGGAAAGCCAGAAGTATAAGGAAGGAAAGTACATACTTGAGAAGTCTAAAATTGTCATGGAAAATTGGTAG 858 0.4126 MANLLSHKWFLVSLLITLLQIQTKVLCYQYKVGDLDSWGIPTSSNPQVYAKWSKYHNLTLGDSLLFLYPPSQDSVIQVTEESYKSCNLKNPISYMNNGNSLFNITSHGDFYFTSGEPGHCQKNQKLHISVGGGGGKENVNAAPGPSSLSAYAPSYPTVFGNIPISPSSSASPKLTSTFQVLTIGSVICALFYALINHVALHDDVISKAFQGRNGRAFLFSHAMNITVGPKEDRELMTGLHTIADVYCSDCHKVLGWKYERAYEESQKYKEGKYILEKSKIVMENW 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi272g00060 285 ProSiteProfiles Phytocyanin domain profile. 28 132 IPR003245 GO:0009055
Sebi272g00060 285 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 196 282 IPR039058 -
Sebi272g00060 285 Gene3D - 28 142 IPR008972 -
Sebi272g00060 285 Pfam Plastocyanin-like domain 47 123 IPR003245 GO:0009055
Sebi272g00060 285 FunFam Early nodulin-like protein 1 27 134 - -
Sebi272g00060 285 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 216 281 IPR004910 -
Sebi272g00060 285 ProSiteProfiles Yippee domain profile. 187 284 IPR034751 -
Sebi272g00060 285 SUPERFAMILY Cupredoxins 27 130 IPR008972 -
Sebi272g00060 285 CDD OsENODL1_like 28 130 IPR041846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi272g00060 Sebi-Chr272 811667 814275 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi272g00060 11 164 Phytocyanin Superfamily AT1G64640 55.195 1.04e-50 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi272g00060 - - gmx:100527517 286.189