Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi272g00039 ATGGAGATCATAGAAGCAAGCAAAGCAGCAGGGTTGAGCCCTCTGAGTGAGAGCATTTGGAGGGAAAAAACAAACACAGAGTTAATTGGAGATGTCTCAGCAAGGCTGACATGGAAGGATCTAACTGTGATGGTAACTCTGAGCAATGGAGAGAGCCAGAACGTTTTGGAGGGTCTAACTGGGTATGCTGAACCTGGAACCTTCACGGCTCTAATGGGTCCCTCTGGTTCAGGAAAATCTACCCTGCTCGATGCTCTGTCTAGTCGTCTAGCAGCAAATGCCTTCCTCTCAGGCACCATCCTCCTCAATGGTCGCAAAGCCAAGCTTTCCTTTGGCACAGCAGCTTATGTGACCCAAGATGACAACTTGATTGGTACACTAACGGTACGAGAAACAATTTGTTATTCAGCTCATTTGCGGCTGCCTGATAAAATGGCATGGTCAGATAAACGAGCTCTGGTTGAGAGTACCATTGTAGCGATGGGTCTTCAGGACTGTGCTGATACAGCGATTGGAAACTGGCATTTGCGTGGTATAAGTGGAGGAGAGAAGAGAAGGGTTAGCATTGCCTTGGAGATCTTGACAAGGCCTAGATTACTTTTCCTTGATGAGCCAACTAGTGGACTTGACAGTGCTTCGGCTTTCTTTGTGACTCAGACATTAAGAGCCCTGGCAAGGGATGGGCGAACTGTGATAGCTTCTATTCATCAGCCTAACAGTGAATTCTTTGCACAAGCTGGATTTCCATGCCCTGCTTTGGGAAACCCATCAGATCATTTTCTTAGGTGCATCAATTGTGACTTTGACAAAGTCAAGGCCACTCTTAGCGGGTCCATGAAACTGAGGAGGTCTGAGGGAAGTGATGATCCCCTGGACAAGATCACTACTGCTGAAGCTATCAAAACTCTTACAGGCTACTACCGAACTTCTCAGTATTCTTATGCTGCAATGCGGAAAGTGGATGAGATATCCAAAGTTAAGGGAACAGTGCTTGATGCAGGAGGAAGTCAGGCTAGTTTTTTAATGCAATCTTACACCTTAACCAAGCGCTCATTCACCAACATGTCAAGGGATTTTGGGTACTATTGGCTTAGGCTTGTAATCTATATTGTAGTCACAATCTGCATTGGAACCATTTATTTGAACGTGGGGACGGGCTACAACTCAATTCTGGCAAGGGGTTCATGTGCATCTTTTGTCTTTGGTTTTGTCACCTTCATGTCAATTGGTGGGTTCCCTTCATTTGTTGAAGACATGAAGGTTTTCCAAAGAGAGAGGCTTAATGGCCACTATGGTGTCACGGCATTTGTTATCAGCAACACATTATCTGCAACTCCCTTCCTAATATTGATCACCTTTCTCTCAGGAACTATTTGTTACTTCATGGTTGGCCTACATCCTGGCTTTAGGCACTATCTGTTCTTTGTCTTGTGCCTATATGCCAGTGTTACAGTGGTTGAAAGCTTAATGATGGCCATTGCCAGCATTGTCCCCAACTTTCTCATGGGTATAATAATAGGAGCAGGGATTCAAGGCATATTCATGTTGGTCTCTGGCTACTTTAGGCTCCCACATGATATCCCAAAGCCAGTGTGGCGCTACCCAATGTCATATATCAGTTTCCACTTTTGGGCATTACAGGGACAATACCAGAATGATTTGCGGGGCTTGCTATTCGACAACCAGACACCAGATCTTCCCAAGATACCTGGTGAATACATCCTGGAGAATATCTTCCAGATTGATGTGAAGAGATCCAAGTGGATAGATTTAAGTGTGATCTTAAGCATGATTGTCATCTACCGCATTATCTTCTTGATGGTGATTAAGATCAATGAGGATGTTACACCATGGGTTAGAGGCTACATAGCTAGGAGAAGAATGCAGCTGAAGAATGGAACCCAGAATACAACTATTGCTCCTGATGTTCTCACTCAATCCCCATCCCTCAGAACCTATATCTCGATTTAA 1971 0.4465 MEIIEASKAAGLSPLSESIWREKTNTELIGDVSARLTWKDLTVMVTLSNGESQNVLEGLTGYAEPGTFTALMGPSGSGKSTLLDALSSRLAANAFLSGTILLNGRKAKLSFGTAAYVTQDDNLIGTLTVRETICYSAHLRLPDKMAWSDKRALVESTIVAMGLQDCADTAIGNWHLRGISGGEKRRVSIALEILTRPRLLFLDEPTSGLDSASAFFVTQTLRALARDGRTVIASIHQPNSEFFAQAGFPCPALGNPSDHFLRCINCDFDKVKATLSGSMKLRRSEGSDDPLDKITTAEAIKTLTGYYRTSQYSYAAMRKVDEISKVKGTVLDAGGSQASFLMQSYTLTKRSFTNMSRDFGYYWLRLVIYIVVTICIGTIYLNVGTGYNSILARGSCASFVFGFVTFMSIGGFPSFVEDMKVFQRERLNGHYGVTAFVISNTLSATPFLILITFLSGTICYFMVGLHPGFRHYLFFVLCLYASVTVVESLMMAIASIVPNFLMGIIIGAGIQGIFMLVSGYFRLPHDIPKPVWRYPMSYISFHFWALQGQYQNDLRGLLFDNQTPDLPKIPGEYILENIFQIDVKRSKWIDLSVILSMIVIYRIIFLMVIKINEDVTPWVRGYIARRRMQLKNGTQNTTIAPDVLTQSPSLRTYISI 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi272g00039 656 SMART AAA_5 65 236 IPR003593 GO:0016887
Sebi272g00039 656 FunFam ABC transporter G family member 11 30 247 - -
Sebi272g00039 656 Gene3D - 30 246 IPR027417 -
Sebi272g00039 656 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 36 280 IPR003439 GO:0005524
Sebi272g00039 656 Pfam ABC-2 type transporter 343 549 IPR013525 GO:0016020|GO:0140359
Sebi272g00039 656 Pfam ABC transporter 58 207 IPR003439 GO:0005524
Sebi272g00039 656 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 240 IPR027417 -
Sebi272g00039 656 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 241 631 - -
Sebi272g00039 656 ProSitePatterns ABC transporters family signature. 179 193 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi272g00039 Sebi-Chr272 431705 436483 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi272g00039 66 237 Calmodulin-binding Proteins AT2G36910 33.880 5.96e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi272g00039 K05681 - gmx:100803731 1164.06