Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi272g00008 ATGAGGCCCATTTTGGCTCATTTATCTCCCAACAAAAGTGGGTCAATTAGTCCTTCTGATCAGTCTGATGAGAAGGAATGTGAAGGAGGGATAAAGGAGGTGGAAAATCCAACTGAAAATGTGAAGAAGAGGTCCAGAACTAAGTTCACACAAGAACAGAAGGAGAAGATGCTGGGTTTTGCAGAAAAGGCAGGGTGGAGGATACAGAAACTAGAGGAATCTGTGGTGCAGAAGTTTTGCCAAGAGGTTGGAATCAAGAGAAGAGTGCTCAAAGTGTGGATGCACAATAACAAGAACACTTTTGCCAAGAGAAATCTCTCCATTAGCTAG 330 0.4303 MRPILAHLSPNKSGSISPSDQSDEKECEGGIKEVENPTENVKKRSRTKFTQEQKEKMLGFAEKAGWRIQKLEESVVQKFCQEVGIKRRVLKVWMHNNKNTFAKRNLSIS 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi272g00008 109 SUPERFAMILY Homeodomain-like 37 103 IPR009057 -
Sebi272g00008 109 NCBIfam homeobox domain, ZF-HD class 42 99 IPR006455 -
Sebi272g00008 109 MobiDBLite consensus disorder prediction 19 50 - -
Sebi272g00008 109 MobiDBLite consensus disorder prediction 1 50 - -
Sebi272g00008 109 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 24 100 - -
Sebi272g00008 109 Gene3D - 22 103 - -
Sebi272g00008 109 FunFam Zinc-finger homeodomain protein 2 30 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi272g00008 Sebi-Chr272 47569 47898 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi272g00008 32 105 ZF-HD Transcription Factor Family AT1G14440 66.216 7.00e-30 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi272g00008 - - gmx:100793926 188.348