Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi272g00002 ATGGCTTCAATTGCGAATGGCCAAGAAGCAATTGAACTCTTTCAGGGCCAAGCTTTGTTGTACATGAACATGTTTGGCTTCCTAAAATCCATGTGTCTTAAATGGGCTGTCCAACAAGGCATTGCAGACATAATACACAACCATGCCAAACCCATTACTCTTCCTGAATTGGTGTCAACTCTTCAAGTTCCACCATCCAGGGCTAGTTTTGTGCAGCGACTCATGCGCTTTCTAGCACACAATGGAATCTTTGCAATAATCCATGAGAGCAAAGAGGGTCATGAAGCATATGCTCTGACTCCAGCATCAAAGCTTCTTTCAAAGGCATGTAGTGACCATTGTTTGTCTCCAATTGTTAAGATGTCTACTGATCCAGTTCTCATGAATAAGTTCCACCAATTGGGGGACTGGATTTGTGGAGAAATCCCCACTTTATATGAGGCAGCCTTAGGAAAACCCGTGTGGGAATTTCTTGAGGAAACTCCTGCTTATATGAGTCTCTTCAATGAGGCAATGGCAGGGGATTCTCAAATGGTAGACTTGGCATTGAAAAATTGCAGTTCAGTCTTTGAGGGGCTAGATTCCATTGTGGATGTTGGTGGTGGAACTGGAACCACAGCTAAAATTATCTCTGAGGCATTCCCTAAGTTAAATTGTGTTGTGTTTGACCTTCCACAGGTTGTGGCTAATTTGTCAGGTAACAACAATTTGAGTTATGTTGGTGGGGACATGTTCCAATCTATCCCTCAAGCCGATGCAATTCTAGTATAG 771 0.4293 MASIANGQEAIELFQGQALLYMNMFGFLKSMCLKWAVQQGIADIIHNHAKPITLPELVSTLQVPPSRASFVQRLMRFLAHNGIFAIIHESKEGHEAYALTPASKLLSKACSDHCLSPIVKMSTDPVLMNKFHQLGDWICGEIPTLYEAALGKPVWEFLEETPAYMSLFNEAMAGDSQMVDLALKNCSSVFEGLDSIVDVGGGTGTTAKIISEAFPKLNCVVFDLPQVVANLSGNNNLSYVGGDMFQSIPQADAILV 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi272g00002 256 SUPERFAMILY "Winged helix" DNA-binding domain 12 108 IPR036390 -
Sebi272g00002 256 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 256 IPR016461 GO:0008168
Sebi272g00002 256 Gene3D - 1 106 IPR036388 -
Sebi272g00002 256 Gene3D Vaccinia Virus protein VP39 109 256 IPR029063 -
Sebi272g00002 256 FunFam Coniferyl alcohol 9-O-methyltransferase 3 106 - -
Sebi272g00002 256 PANTHER O-METHYLTRANSFERASE 15 255 IPR016461 GO:0008168
Sebi272g00002 256 Pfam O-methyltransferase domain 131 255 IPR001077 GO:0008171
Sebi272g00002 256 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Sebi272g00002 256 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 112 255 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi272g00002 Sebi-Chr272 14806 15576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi272g00002 31 256 Monolignol Biosynthesis Gene Families AT5G54160 31.169 6.34e-31 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi272g00002 K22588 K13262 gmx:100791825 357.836