Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi271g00064 ATGGGTTATGGTTGTGTGAGGGCGGAGATGGTATTAATATTATTACTAATCTGCTGCTTTCTTGTCCCAGCATCAAGGGCTGAAAGCTTCAACTGCTGGCAGAGAAGGATCAGGTGTCAAGCCTTGGTTGGTTTCAGGCCGCGAGTGCCAACTACCTTAGGGGCCATCCAAACCCTCTTTAACGTGACTCACGTGGCAGACATTCTCGGTGCTAACGGCCTTCCGGAATGGACCCAACCCAACAATTTCAAGGTGGAAGTGAATCAGTTTATCAGGATACCTTTTGAGTGCGACTGCAGTACTGGTTTCTACGGTGTGCCCACTAACCCGCCAGTGTACAAGGTGCAAACGGGTGATTATAATATTTCTTATATAATAACGAGCGTGTTCTCGGGATTGGTGGGTTTAACGGATATCAAGAATGGTAACGATATGAAGGATTTTGATTTTAACAATTTGACGACGGGACAAGAACTGCGAATGCCACTCCCTTGTAGCTGCGGGCAGGTGAATGGGGTGGATGTGGTTCACTTTGGATTGACGCTGGAATATGGACTCACCGTGGAACAGATAGCAGAGGAATACCATGTCCAGCCACAAACCATCTGGACTTTGAACGATGCAACGAGTCCTGATCTTATCCTTGGCCGGGCTTTAGATATTCCTCTCCCAGTCTGTTCTTCGATGGTGAGAAACGATTCATTGGACTACCCTTTGCTTGTTCCACATGGTTCTTATGTCTACACCGCGAATGGATGTGTGAGATGCCACTGCGATGCTGCCAAAAACTGGACATTATCATGCGTGCCATCCAATCATAAGCCAACAAACTGGTCGTCTTGCCCATCTATGCAATGCAGCAATTCAACCAGCAGCATGTACATTGGCAACACCACATATTCAAGTTCTCACAATCTTACAATTTGTGCCTACGCTGGTTACACAAGTCAAATCATCTTCACTACCCTTGCAACAATGTCTATTATTCCTCCCGAGAGTGCAGAAAACAGGTGGTGGATATCGCTTATTGTGATAGGAGGAGTTATTATTGTACTTATATTCTGCTACTTGTGTTGTGTGATCTGGAGAAAATACAAGATAGAAGCTGACAGAAAAAAGAAAATGAAGATAATAATAAGGGAAATTGGAGTCAGTACCGTGGCATCCACCATATATCATAAAACAAAGAGACACAACAAAGATGGCAAGGCCAACAATGAAATGCGGTTATTTAGCTTTGCAAGCATTGTTGCTTCTACAGACAACTTTTCAGTTGCAAACAAGTTAGGAGAGGGTGGCTTTGGACCAGATTATAAGGGGAAACTTCCAGATGGACAAGAAATAGCAATTAAGAGACTTTCTAGTAGATCAGGGCAAGGGTTGGTGGAGTTCAAAAATGAAGTTAATCTCATAGCAAAACAGCAGCATACTAATCTAGTAAGGCTTTTGGGGTTCTGCATACAAAGTGAAGAAATGTTATTAATCTATGAGTACATGCCCAACAAAAGTTTAGACTTTCATATCTTTGATTCTAACAAAAGGGAAACAATATCTTGGGAACAAAGATTCAACATCATTGAAGGCATAGCTCATGGTTTGGTTTATCTCCATCATTTTTCAAGATTAAAAGTGATTCACCGAGATTTGAAAGCTAGCAACATATTACTTGATTATGAGATGAACCCCAAAATTAGTGATTTTGGCATGGCAATATTATTTGATTTTAAAGGAATAGAAGAGAACACAAAAAGAATTGTTGGGACATATGGTTACATGTCTCCAGAGTATGCCATGAATGGCATAGTCTCAGTGAAGACTGATGTGTTTA 1828 0.4179 MGYGCVRAEMVLILLLICCFLVPASRAESFNCWQRRIRCQALVGFRPRVPTTLGAIQTLFNVTHVADILGANGLPEWTQPNNFKVEVNQFIRIPFECDCSTGFYGVPTNPPVYKVQTGDYNISYIITSVFSGLVGLTDIKNGNDMKDFDFNNLTTGQELRMPLPCSCGQVNGVDVVHFGLTLEYGLTVEQIAEEYHVQPQTIWTLNDATSPDLILGRALDIPLPVCSSMVRNDSLDYPLLVPHGSYVYTANGCVRCHCDAAKNWTLSCVPSNHKPTNWSSCPSMQCSNSTSSMYIGNTTYSSSHNLTICAYAGYTSQIIFTTLATMSIIPPESAENRWWISLIVIGGVIIVLIFCYLCCVIWRKYKIEADRKKKMKIIIREIGVSTVASTIYHKTKRHNKDGKANNEMRLFSFASIVASTDNFSVANKLGEGGFGPDYKGKLPDGQEIAIKRLSSRSGQGLVEFKNEVNLIAKQQHTNLVRLLGFCIQSEEMLLIYEYMPNKSLDFHIFDSNKRETISWEQRFNIIEGIAHGLVYLHHFSRLKVIHRDLKASNILLDYEMNPKISDFGMAILFDFKGIEENTKRIVGTYGYMSPEYAMNGIVSVKTDVF 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi271g00064 609 ProSiteProfiles LysM domain profile. 111 161 IPR018392 -
Sebi271g00064 609 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 388 498 - -
Sebi271g00064 609 Pfam Protein kinase domain 424 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi271g00064 609 Pfam LysM domain 187 222 IPR018392 -
Sebi271g00064 609 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 284 609 - -
Sebi271g00064 609 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 499 590 - -
Sebi271g00064 609 SUPERFAMILY Protein kinase-like (PK-like) 406 609 IPR011009 -
Sebi271g00064 609 Gene3D Transferase(Phosphotransferase) domain 1 499 609 - -
Sebi271g00064 609 ProSitePatterns Serine/Threonine protein kinases active-site signature. 544 556 IPR008271 GO:0004672|GO:0006468
Sebi271g00064 609 SMART serkin_6 423 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi271g00064 609 Gene3D Phosphorylase Kinase; domain 1 384 498 - -
Sebi271g00064 609 ProSiteProfiles Protein kinase domain profile. 423 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi271g00064 Sebi-Chr271 1270138 1273684 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi271g00064 394 609 Receptor kinase-like Gene Family AT4G05200 58.333 1.14e-82 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sebi271g00064 Pkinase 5e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi271g00064 - - gmx:100811504 823.928