Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi271g00053 ATGCCCAAGAAGATTCAAAAAACCCTTCAAGATTACCTCTTCAAGATCAAAAAACCTCACCCCCCTCAAATCCAATTACCCTTTAACTCAAAATCAAAAAGCTGGATTCTTTCTGGCTGCAAGCATCCAAAGACACCATCTTTTGCCTTAGACGACAGAAATAATCACAAGGTCGACGATGCAGCCACTTTAGCAGACGTTGATCGTTTCCTCTTCGAGAATTTCAGGTCCCTATACCTCAAAGACGATGAAGAACCAGAAAATTACAAAAGGGTCTCTGAAGAAAGTCACAACGATGAAGAAATTCCACTGCCTGATCTCTGTGGCTCCACTCGATTCTTCGTGAAGCCAGGCATGTCAGGGTCTCTGTTAGAGGATGCTATGACAATCACAAGTGATGAAGCAGGGTCGAGTTCAACATCAATCACAACACTCAATGATTCATGCTCTCTAAAGGAGGACATGAATAATAATAATAATCACATTCATACTCTTCCTGATAATTGTGTTGCGCTATTGACTTACTCGATGAGTCCCTATGAGGAATTTCGGCGTTCAATGCAGGAAATGGTGGAAGCAAGGACCAAATATGGTGAAGGGGTGATTGATTGGGATTTCATGGAGGAGCTATTGTTCTGTTACTTGAACCTCAATGAGAAGAAGTCCCATAAGTACATTCTCAGTGCTTTTGTGGATCTAATCACTGTTATGCGTCGGAATTCAGAGACAGATTCGGTAAAGCCACGGAGTGTTCGAACTATTAGGATTGGTGGGGAGGTGAGGAAGAAGAACAATGCGGGACGAGGTTCAAGGAAAGGAAGACCATAA 828 0.4263 MPKKIQKTLQDYLFKIKKPHPPQIQLPFNSKSKSWILSGCKHPKTPSFALDDRNNHKVDDAATLADVDRFLFENFRSLYLKDDEEPENYKRVSEESHNDEEIPLPDLCGSTRFFVKPGMSGSLLEDAMTITSDEAGSSSTSITTLNDSCSLKEDMNNNNNHIHTLPDNCVALLTYSMSPYEEFRRSMQEMVEARTKYGEGVIDWDFMEELLFCYLNLNEKKSHKYILSAFVDLITVMRRNSETDSVKPRSVRTIRIGGEVRKKNNAGRGSRKGRP 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi271g00053 275 Pfam Transcriptional repressor, ovate 176 235 IPR006458 -
Sebi271g00053 275 NCBIfam uncharacterized plant-specific domain TIGR01568 170 236 IPR006458 -
Sebi271g00053 275 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 85 237 IPR038933 GO:0045892
Sebi271g00053 275 ProSiteProfiles OVATE domain profile. 172 236 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi271g00053 Sebi-Chr271 1068529 1069913 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Sebi271g00053 Ovate 2.4e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi271g00053 - - lja:Lj3g3v0160750.1 319.701