Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi271g00040 ATGACCATGAAGACTGAAGATGATTTAGAGTGGCACCCGAAAAGGCAAAAGGTGAAGAGTTTGATTTCAACCTATGAATTTGCACCTAGGGTGCCAGCACCATCAGCTGCAGCTCCCTCAGCTCCTACACCATCTTTTGGGGGTAGGAATTCCCTTACTGACTGGACTGAGCATGAGACATTTGTTCTTCTTGATGCATGGGGTGAGCGGTTTCTTCAACATGGAAGGAAGAGTCTTAGATCTGAGGAGTGGCAAGAAGTTGCAGAGAAGGTATCAAAAGTTTCAAAAATTGAAAGGACAGATACTCAGTGCAGAAATCGTCTAGATACATTGAAGAAAAAATACAAGAAGGAGAAGATTAAATTTCCGGAAATGTGTGGTGAAAATAGCAAATGGGTTTATTTTAAAAGGATGGATAAGCTAATGTCTTCTCCACCACAACAAGGGGGTCTCTCTTGTGGTATAGACTCAGGAGAGTATGTTTTTCTGAATCCTAGAGTTTATTTGAACTGTGCAAATGGGTTGGATGAAATGAAGGATAGTCCTGAGAATACAGAATCTATTGGTGAAGAAGATTCAGATGGACCTCAAGCAAAGAAAAGAAGGAAAGGAAGGGGCAATGGTGGTGGTTCTTCCTTCAGATTACTTGCTGATTCCATTAAGAAATTCAGTAAGATATATGAGAAGATTGAAAATAGTAAAAGGCAGCAGATGGTGGAACTGGAAAAGATGAGGATGGATTTCCTTAAGGACTTGGAAATGCAGAAGAGGCAGATTGTAGAAAGATTACAGGGTGAGATTTCAAAACTAGAGCAGAGAGATGATAATGATGATTCTGCTGAGAATGGTATGTGA 855 0.4035 MTMKTEDDLEWHPKRQKVKSLISTYEFAPRVPAPSAAAPSAPTPSFGGRNSLTDWTEHETFVLLDAWGERFLQHGRKSLRSEEWQEVAEKVSKVSKIERTDTQCRNRLDTLKKKYKKEKIKFPEMCGENSKWVYFKRMDKLMSSPPQQGGLSCGIDSGEYVFLNPRVYLNCANGLDEMKDSPENTESIGEEDSDGPQAKKRRKGRGNGGGSSFRLLADSIKKFSKIYEKIENSKRQQMVELEKMRMDFLKDLEMQKRQIVERLQGEISKLEQRDDNDDSAENGM 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi271g00040 284 Pfam Myb/SANT-like DNA-binding domain 54 141 IPR044822 -
Sebi271g00040 284 MobiDBLite consensus disorder prediction 179 201 - -
Sebi271g00040 284 FunFam trihelix transcription factor ASIL2 55 117 - -
Sebi271g00040 284 MobiDBLite consensus disorder prediction 179 213 - -
Sebi271g00040 284 Coils Coil 253 273 - -
Sebi271g00040 284 ProSiteProfiles Myb-like domain profile. 55 112 IPR001005 -
Sebi271g00040 284 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 40 275 IPR044823 -
Sebi271g00040 284 MobiDBLite consensus disorder prediction 265 284 - -
Sebi271g00040 284 Coils Coil 227 247 - -
Sebi271g00040 284 Gene3D - 55 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi271g00040 Sebi-Chr271 922606 923460 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi271g00040 201 273 Trihelix Transcription Factor Family AT3G14180 46.575 5.28e-13 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Sebi271g00040 Myb_DNA-bind_4 2.4e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi271g00040 - - gmx:100814194 424.091