LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi271g00008	ATGAATGGTATAGGCAAAATATCAGCCTGTCACATGGAAATATTACCTAAAAAAACCATAGAGAATAACACAGATAAGATGGATGTTACTTCTCTTGGTCCAAATAGAAGCATCCAAACTGAACAACATCCTTTGCTGATGGAGCAGCCAGAAACCCGCAATGGCCATCAGCACATAATTGACATTACAAGGAATGATGAAGCATTATCCACATCATCTCATAATGATCAACACTCTGAAATGCATTTACCACAGAATGAAGATCAACCAGCTGGGGGTACACAAGATTCCACTCATCAAACATCTTCATCTTCTGCATCCAGATTAAACTCTAGAAATTCCTCTTCGTTTAGAAGAGGTGAGGGATATAGTCATCGCAGAAGGAGTCCATTGAATTCTGCACTATGGATTTCTGTTGAGCTTGTTGTCACTGTGAGTCAGATCATAGCATCTATCGTGGTTTTGTCATTGTCCAGGAATGAAAATCCCCAAGCCCCATTATTTGCATGGATTGTGGGTTATGCATCTGGTTGTATTGCCACACTTCCTATTCTTTACTGGCGTTTTCGAAACCGTAATCAAAGCACTGATCAACATACCTCTCAACCATCTCAAGGATCTTCTGGAAGCAATCCTCCAGAAAGTACTTATACTGCCATCTCTGTTTCCCATGTTTCAGATGAGGACAATGGCCATGCTACACAATCAGCAGCAAGAAACACTATAATTCCTGGAGCCTTTACTTCTAGGCTCAATGGATTAGTAGACCATTTCAAGATGGCCTTGGATTGCTTCTTTGCAGTTTGGTTTGTAGTAGGAAATGTTTGGATCTTTGGAGGTCATGCTTCTCCTTCTGATGCACCACAATTATATAGGTTGTGTATTGTGTTTCTTACCTTTAGCTGTATCGGATATGCTATGCCATTTATACTCTGTGCAACAATTTGTTGCTGCCTACCTTGCATAATTTCTGTTTTGGGCATTCGGGAGGATTTTTCTCAAAATAGAGGAGCAACAGTAGAATCTATTAATGCTCTTCCAATCTATAAGTTCAAATTGAAAAACAGTGAAAATGGTGATGATCAGGATATCAATGCAGCTATAGATGAAGGTGGGATTTTGGCTGCAGGGACAGAAAATGAGCGGGTGATTTCAGGAGAAGATGCTGCACACAGCCAAAAGAAGAATGAATAA	1194	0.4012	MNGIGKISACHMEILPKKTIENNTDKMDVTSLGPNRSIQTEQHPLLMEQPETRNGHQHIIDITRNDEALSTSSHNDQHSEMHLPQNEDQPAGGTQDSTHQTSSSSASRLNSRNSSSFRRGEGYSHRRRSPLNSALWISVELVVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCIATLPILYWRFRNRNQSTDQHTSQPSQGSSGSNPPESTYTAISVSHVSDEDNGHATQSAARNTIIPGAFTSRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGHASPSDAPQLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDFSQNRGATVESINALPIYKFKLKNSENGDDQDINAAIDEGGILAAGTENERVISGEDAAHSQKKNE	397

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi271g00008	397	PANTHER	C3H4 TYPE ZINC FINGER PROTEIN	47	389	-	-
	Sebi271g00008	397	MobiDBLite	consensus disorder prediction	69	126	-	-
	Sebi271g00008	397	MobiDBLite	consensus disorder prediction	195	216	-	-
	Sebi271g00008	397	MobiDBLite	consensus disorder prediction	88	118	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sebi271g00008	Sebi-Chr271	396776	400970	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sebi271g00008	27	390	C3H Transcription Factor Family	AT1G80400	54.768	2.97e-134	389

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sebi271g00008	-		-	gmx:100819516	625.935