Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi271g00005 ATGAAGAAAGAAAAGAGTGTCACTGTGAAAGCTGGTGAGGTCCCTGGTCGATTGACTCGTGCTCGAGCTGCTGCTTTTCGTGCTTCTGGACAGTTGCCCCCTTTGAAGGGGGCACCACAAGGAAGTCAGAAGCAGTCCCTAGGAGCCAATTCAAAAAGAGCAGTTTCAGACAATACATGTCTTCCGCGAAAGAAGAGGGCTGTTTTTCAGGATGTCACTAACGTTTGCTGTGAAAATACATACACTAGCTGTTTCAATGCAGCTAAAATTCAGGGTAAGAAAAGCAAGCTGGCTAAGCCTGCTCAACTCAGTGTTTCCAAAGTGGTTCCATCAGTTGCTGTGGAGCTACCACAACTTCAAGTTGACTCAAAAGCAGAGAGTTTGCCACAAACGGGGCTTAGATCAGAAGATGTCATGTGCTCAGTTAATTTGGAAGACAATGCAATTCTTCATCTGAGTGCCAACCGGTGTGGCACATATGATAATCTGCTTGACAGCCAGACATCTGGAATATCTGCTCAGCCTTTGATTTCTCAAAAGAAAGCTTCACAAACTGTTGCAGCCAAGAAAGGTAGCCTTTCTGAATCTCTGAATGCATCAAAGGATCCAGATGTTGCTGACATAGATGCTGATTTTGAGGACCCTCAACTGTGCAGCATGTATGCCACTGATATCTATGACAACTTGCATGTTGCTGAGCTGTCGAGAAGGCCTTGTCCTAACTTCATGGAAACAGTACAGCGAGATATCACTCAAAGCATGCGTGGGATACTGGTTGATTGGCTTGTAGAGGTTTCTGAGGAATACAGATTGGGAGCAGACACTCTTTACCTCACTGTATATCTCATAGATTGGTTTCTCTCAAAAAATTACATTGAAAGACAAAGACTTCAGCTGCTTGGCATCACCTGCATGCTAATTGCCTCGAAGTACGAAGAAATTAATGCCCCTCGTATTGAAGAATTCTGCTTCATCACAGACAACACATACAAAAAAGAAGAGGTACTTAAAATGGAAACTGAAGTGTTAAAGTCCTCTGCATATAAACTGTTTGCTCCCACTACAAAAATTTTCCTCAGGCGGTTTCTTCGAGCAGCACAGGCTTCTTACAAGAGTCCCAGCTTTGAATTGGAGTACTTGGCCAATTACCTGGCTGAACTAACACTGATGAACTATGGTTTCTTAAACTTCCCTCCTTCTAAGATTGCTGCATCTGCTGTATTTCTCGCCAGATGGACATTAGATCAGTCAAGCCACCCATGGAATCCAACTCTTCAACATTACGCTTCTTACAAGGCATCAGATTTGAAAACCACAGTTGTTGCATTACAGGATCTACAGCTCAATAGCGATGGCTGCCCTTTAACTGCAATCCGCACAAAGTACAGACAAGACAAGTTCAAATGTGTAGCAGCTTTGTCTTCACCAAAACTGCTTGAAACTCTGTTCTGA 1452 0.4346 MKKEKSVTVKAGEVPGRLTRARAAAFRASGQLPPLKGAPQGSQKQSLGANSKRAVSDNTCLPRKKRAVFQDVTNVCCENTYTSCFNAAKIQGKKSKLAKPAQLSVSKVVPSVAVELPQLQVDSKAESLPQTGLRSEDVMCSVNLEDNAILHLSANRCGTYDNLLDSQTSGISAQPLISQKKASQTVAAKKGSLSESLNASKDPDVADIDADFEDPQLCSMYATDIYDNLHVAELSRRPCPNFMETVQRDITQSMRGILVDWLVEVSEEYRLGADTLYLTVYLIDWFLSKNYIERQRLQLLGITCMLIASKYEEINAPRIEEFCFITDNTYKKEEVLKMETEVLKSSAYKLFAPTTKIFLRRFLRAAQASYKSPSFELEYLANYLAELTLMNYGFLNFPPSKIAASAVFLARWTLDQSSHPWNPTLQHYASYKASDLKTTVVALQDLQLNSDGCPLTAIRTKYRQDKFKCVAALSSPKLLETLF 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi271g00005 483 SUPERFAMILY Cyclin-like 213 345 IPR036915 -
Sebi271g00005 483 MobiDBLite consensus disorder prediction 36 54 - -
Sebi271g00005 483 FunFam Cyclin A1 340 472 - -
Sebi271g00005 483 CDD CYCLIN_AtCycA_like_rpt1 214 345 - -
Sebi271g00005 483 SMART cyclin_7 357 445 IPR013763 -
Sebi271g00005 483 SMART cyclin_7 260 344 IPR013763 -
Sebi271g00005 483 CDD CYCLIN_AtCycA-like_rpt2 353 467 - -
Sebi271g00005 483 Gene3D - 224 472 - -
Sebi271g00005 483 FunFam Mitotic cyclin 6 238 338 - -
Sebi271g00005 483 Pfam Cyclin, N-terminal domain 224 345 IPR006671 -
Sebi271g00005 483 PIRSF Cyclin_A_B_D_E 17 482 IPR046965 GO:0016538|GO:0044772
Sebi271g00005 483 MobiDBLite consensus disorder prediction 26 54 - -
Sebi271g00005 483 Pfam Cyclin, C-terminal domain 353 475 IPR004367 -
Sebi271g00005 483 PANTHER CYCLINS 185 463 IPR039361 -
Sebi271g00005 483 Gene3D - 238 351 - -
Sebi271g00005 483 SMART Cyclin_C_2 353 476 IPR004367 -
Sebi271g00005 483 SUPERFAMILY Cyclin-like 353 478 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi271g00005 Sebi-Chr271 146734 151736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi271g00005 1 483 Core Cell Cycle Gene Families AT1G80370 53.388 1.04e-169 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi271g00005 K06627 - gmx:100789757 677.552