LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi270g00036	ATGGGGATGGCTGCAGCAGAGTCACAGTTTCATGTATTGGCTGTTGATGACAGCATCATAGATAGGAAGCTTATTGAGAGGCTTCTCAGAACCTCTTCCTATCAAGTTACTACAGTTGATTCTGGTAGCAAGGCTTTAGAGTTTCTGGGCTTGCATGAGAATGATGAGAGCAACCCAAATACACCATCTGTTTCTCCTAATAATCATCAGGAGGTGGAAGTGAACCTTGTTATAACAGACTACTGTATGCCTGGCATGACAGGCTATGATTTGCTTAAGAAAATCAAGGAATCTTCATCTTTGAGAAACATACCAGTTGTGATTATGTCATCTGAGAATGTGCCTTCAAGGATTACCAGATGCTTGGAGGAAGGAGCAGAGGAATTTTTCTTGAAGCCTGCCAACAATAACAAGAGGAAGACCATGGAACAGGGGCTTTCACCTGAGACTGACAGAACAAGACCAAGATACAGTGACATAGCCACTGTAGTATGA	495	0.4263	MGMAAAESQFHVLAVDDSIIDRKLIERLLRTSSYQVTTVDSGSKALEFLGLHENDESNPNTPSVSPNNHQEVEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRITRCLEEGAEEFFLKPANNNKRKTMEQGLSPETDRTRPRYSDIATVV	164

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi270g00036	164	PANTHER	TWO-COMPONENT RESPONSE REGULATOR	10	141	IPR045279	GO:0009736
	Sebi270g00036	164	SMART	REC_2	10	146	IPR001789	GO:0000160
	Sebi270g00036	164	MobiDBLite	consensus disorder prediction	138	164	-	-
	Sebi270g00036	164	CDD	REC_typeA_ARR	12	133	-	-
	Sebi270g00036	164	Pfam	Response regulator receiver domain	12	138	IPR001789	GO:0000160
	Sebi270g00036	164	Gene3D	-	11	159	-	-
	Sebi270g00036	164	SUPERFAMILY	CheY-like	9	136	IPR011006	-
	Sebi270g00036	164	ProSiteProfiles	Response regulatory domain profile.	11	147	IPR001789	GO:0000160

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sebi270g00036	Sebi-Chr270	944504	946035	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sebi270g00036	1	140	Response Regulator Gene Family	AT3G57040	78.472	3.11e-75	223

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	Others	Sebi270g00036		Response_reg	1.1e-19	CL0304

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sebi270g00036	K14492		-	tcc:18598779	257.299