Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi270g00035 ATGCCAGGAAAGTGGGACAAAGCAGTGGAGCAAATGCTGACACAGGGGGATGTTGCTCATAATGCTGCTAAACTTGGTCAGAATGATGTTCAGACTGTTGTTAATCAAGCTACTCAGTCCACTGGAACCAAGGCCCACTCAGCCAAGTGGCCCAACACTACATACTACTGCACCACCCCTGTTGCACCACCCACTGTTGCACTACCTACTGCTGCTAGGCCCACACAGCCAAATGAATTTCAACCTGGTGACCATTTTGGACATATTGAAGCTCTTAAAAATGCTCATAACATGACAATGTTGTCACGTGCCATAACAAAAGTCCCAATGCCACAAAAACTTGTTGATGCAAATAACATCTTGCATGACCTAATGGAGGTCACTTCTGGAAACAATTATGATTGGAGAAGAGTTGCTGAACAGCTAGGTCTGACTCAAGATGAGGGTTACATGGGATTTATCGAACAAGTGATTTTGACTTCAACAAGACGACCTCCTCACCACAAGAACAGAGCATCCTTCGCGCGATGGAAGAAGACGAAGAGAAAACCTACACGAACCGCTTCTCTTCTCTCGGACATTATCAATACCTTTCCCTTTCCCTTTCGGCCACTATACTCTGAAATGGTGTTAGGGTTCCACTTCGGTAATGGTTGCAGAGAAGACGAGGTTGGGGACGATGGTGATTATGGGAGAGAAAAGGGGTTCCTTAATTATATAAGTGGTTATTCCACGAGAGAGGGTGGGAAAAGGAGGGACACGTCAGCCCAATCGTCGTTCTGTCACCACCATTCGCCAGCGCTGCTCGTCCTGTGCCGTCGTTCGACGGCGCTGCTCATCCCTCCCTTCTCCGTCACGGCTAAGAGCAAATTATCAGGCCATTATGTAAGAACGATTCAAAGTGAGTACTCTGCTTCACGTCAAAGGACTTTAGATAGAGATAGCACTAGAGCGAATTTCACCAGGGGACGTAAATCAGAACAAGTGCAGGCTGCTTGTCTCTATATTGCATTCCGGGAAAATAATAAACCTTACCTTCTTATTGATTTTTCAAATTATTTAAGGACAAATGTCTATGTGCTAGGTGCAGTTTTTTTGCAGCTTTGTAAAGTATTAAGGCTCGAAGAGCACCCAATTGTTCAAAAACCTGTTGATCCCAGTCTTTTTATTTATAAATATACAAATAATTTGTTAAAGCAAAGGAACGTGCTTGTCTCCGAAACTGCACTGAGCGTTATTGCCAGCATGAAGCGTGACTGGATGCAGACAGGGAGGAAGCCTAGCGGATTATGTGGCGCAGCATTATACATGTCTGCTCTCGCACATGGTTTTAAGTGCTCTAAGTCAGATATTCTAAGGATTGTCCATGTATGTGAAGCAACGTTGACTAAGCGTTTGGTAGAGTTTGAGAATACAGAGTCTGCTAGCTTGACAATTGATGAATTGAATACGATGGCAAAAGAGCATGAAAAAAACCCAATTAAAATACCAGATGGTGAACTGAACAAATGTGCTTCAAAGGATCTACTATGTGAACACAAGGATAGTGGCGTGCCCTACTTTGCACTTGGATTATGTGAAACATGTTACAAGGATTTTGATAAACTCTCTGGCGGACTTGGTGGTGGTTTGGATCCTCCTGCATTCCAGCGTGCTGAGAGGGAGAGAATGACAAAATCACATTCCGAGGAAAGTGCCAATAAGTCAGATGATTTGGCGAAAGCATCAACTGGCGCATGTGAGAGCCAAATAGATGAATTACATGCCTCTGAGCCTGAAAGTATTGCGGCTAAGGAACATGTGGCCACTAAAGATGGTGAGCATGACGAGTCGCATAAAGAAGATGAATCAGAAAGTTTCTCTGATATCGATGATCATGAGGTTGATGGCTACCTTCTTCACAATGAGGTGGAAAAGCATTACAGGAAGACTATGTGGGAACATATAAATCGAGAGTATCTTGAGGAACAAGCGGCCAAGGAAGCAGCTGCTGCTGCTTCTAAGAAAAACTTTGAGGCAAATTTCCAAAACTGCTCTGAGGATTATCTTGCAGCAAGAGAACTTGCTGCATCTGCTACTGCAGCTGTGGCAAAATCCAGAAAGGAAATGAAGCAGAGACGAGCTCAAGAGGCAAAAAGCTTGGGTCCTCCTCAATCTGCTGTAGAGGCCACTCGCCAAATGTTGAGAACAAAGAGGCTCAGCTCCAAAGTCAATTATGATCGCTTGGAAAAATTATTTGATGAACCTGTGGCTCCAGAGAATCCCAAGAAAGTACGATTTGAGCTACCCTCTGATAATCATGATAATTTTGAGTCAAAGGTAGAGGACAAAATAAAGGATGATGAAGTGGGATCAGTGGACGAATTTGAGGATGGTGGTATGGATGGAGAATATGAAAATACTTCGTATCAAGAAAATGCAGACGAGACATATGACTATGAATATGATGGTTATAGCTATGATTATTAG 2469 0.435 MPGKWDKAVEQMLTQGDVAHNAAKLGQNDVQTVVNQATQSTGTKAHSAKWPNTTYYCTTPVAPPTVALPTAARPTQPNEFQPGDHFGHIEALKNAHNMTMLSRAITKVPMPQKLVDANNILHDLMEVTSGNNYDWRRVAEQLGLTQDEGYMGFIEQVILTSTRRPPHHKNRASFARWKKTKRKPTRTASLLSDIINTFPFPFRPLYSEMVLGFHFGNGCREDEVGDDGDYGREKGFLNYISGYSTREGGKRRDTSAQSSFCHHHSPALLVLCRRSTALLIPPFSVTAKSKLSGHYVRTIQSEYSASRQRTLDRDSTRANFTRGRKSEQVQAACLYIAFRENNKPYLLIDFSNYLRTNVYVLGAVFLQLCKVLRLEEHPIVQKPVDPSLFIYKYTNNLLKQRNVLVSETALSVIASMKRDWMQTGRKPSGLCGAALYMSALAHGFKCSKSDILRIVHVCEATLTKRLVEFENTESASLTIDELNTMAKEHEKNPIKIPDGELNKCASKDLLCEHKDSGVPYFALGLCETCYKDFDKLSGGLGGGLDPPAFQRAERERMTKSHSEESANKSDDLAKASTGACESQIDELHASEPESIAAKEHVATKDGEHDESHKEDESESFSDIDDHEVDGYLLHNEVEKHYRKTMWEHINREYLEEQAAKEAAAAASKKNFEANFQNCSEDYLAARELAASATAAVAKSRKEMKQRRAQEAKSLGPPQSAVEATRQMLRTKRLSSKVNYDRLEKLFDEPVAPENPKKVRFELPSDNHDNFESKVEDKIKDDEVGSVDEFEDGGMDGEYENTSYQENADETYDYEYDGYSYDY 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi270g00035 822 MobiDBLite consensus disorder prediction 600 626 - -
Sebi270g00035 822 MobiDBLite consensus disorder prediction 553 570 - -
Sebi270g00035 822 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 313 737 IPR000812 GO:0006352|GO:0070897
Sebi270g00035 822 MobiDBLite consensus disorder prediction 553 582 - -
Sebi270g00035 822 MobiDBLite consensus disorder prediction 756 784 - -
Sebi270g00035 822 Pfam Transcription factor TFIIB repeat 315 369 IPR013150 GO:0017025
Sebi270g00035 822 Pfam Transcription factor TFIIB repeat 382 471 IPR013150 GO:0017025
Sebi270g00035 822 SUPERFAMILY Cyclin-like 384 480 IPR036915 -
Sebi270g00035 822 Gene3D - 305 377 - -
Sebi270g00035 822 FunFam Transcription factor IIIB subunit 385 474 - -
Sebi270g00035 822 MobiDBLite consensus disorder prediction 700 722 - -
Sebi270g00035 822 SUPERFAMILY Cyclin-like 315 375 IPR036915 -
Sebi270g00035 822 MobiDBLite consensus disorder prediction 756 822 - -
Sebi270g00035 822 CDD CYCLIN_TFIIIB90_rpt2 382 472 - -
Sebi270g00035 822 Gene3D Single helix bin 613 664 - -
Sebi270g00035 822 Gene3D - 385 477 - -
Sebi270g00035 822 Pfam Brf1-like TBP-binding domain 621 747 IPR011665 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi270g00035 Sebi-Chr270 866612 885796 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi270g00035 319 731 Inorganic Solute Cotransporters AT2G01280 42.654 9.60e-85 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi270g00035 K15196 - gmx:100789154 628.246