Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi26g00223 ATGGCGGTCCTCGGCGCCAGCGGTTCTGGAAAATCAACTCTGATCGACGCGCTGGCGAACCGAATCGCAAAAGGAAGGCTAAAAGGAAGAGTGGCGCTGAACGGCGAAGCCTTAGAGTCACGGCTGTTGAAGGTGATATCTGCATACGTGATGCAAGACGACCTCCTCTTCCCAATGCTCACCGTGGAAGAGACTCTGAACTTCGCCGCTGAGTTCCGATTGCCTCGCACGCTCTCCAAATCAAAGAAAAAGGCTCGCGTCCAAGCTCTAATCGACCAGCTCGGGCTCCGCAACGCCGCGAAAACCGTCATCGGAGACGAAGGCCACCGCGGAGTCTCCGGCGGTGAACGCCGGCGAGTTTCGATCGGCATCGACATAATCCACGACCCGATCCTGTTATTCCTGGACGAGCCAACCTCTGGTCTTGACTCCACAAGCGCGTTCATGGTGGTGAAGGTGCTTCAGAGAATCGCACAGAGTGGAAGCATCGTGATCATGTCCGTTCACCAGCCAAGTTACCGAATCCTAGGCCTTCTGGACCGCATGATCTTCTTATCACGCGGCCAAACCGTTTACAGCGGTTCTCCGTTGCAGTTACCGTTGTTCTTCGCGGAGTTCGGTCACCCGATACCGGAGAGTGATAACCGGACGGAGTTCGCGTTGGACCTGATTCGCGAGCTTGAAGGTTCTCCCGGAGGAACAAAAAGCTTGGTGGAGTTCAACAAGTCATGGCAGAGCATGACGAAACTTCACCCTGTGGATGCTTCTGAACAACGAAACGGCATGTCGTTGAAGGAAGCAATTAGCGCGAGCATTTCGAGAGGGAAATTGGTGTCTGGCGCAACAAACACCAATACGAACCCGTCGTCTATGGTGCCGACGTTTGCGAATCCGTTTTGGATTGAGATGGCGACGCTGTCGAAACGCTCGTTCACGAATTCAAGGAGAATGCCAGAGCTGTTTGGGATAAGGTTGGGTGCGGTTATGGTCACTGGGTTCATTCTTGCTACAATGTTTTGGCAATTGGATAACTCACCCAAAGGAGTGCAAGAGAGGCTTGGATTTTTCGCATTTGCAATGTCCACAACGTTCTATACCACTGCGGATGCACTCCCTGTTTTCCTCCAAGAACGTTACATTTTCATGAGAGAAACTGCTTACAACGCTTATCGAAGATCCTCATATCTCGTTTCACATGCTCTTGTTGCGTTACCTTCTCTGGTGTTCCTCTCGCTTGCTTTCGCTGCGACGACGTTTTGGGCTGTGGGGCTTGACGGTGGAGTCTCTGGGTTCTTATTTTACTTCCTAATTATCTTTGCTTCCTTTTGGGCTGGGAACTCCTTTGTGACGTTCCTTTCTGGTGTTGTGCCTCATGTGATGTTGGGTTACACCATTGTGGTTGCTATTCTTGCTTATTTCTTGCTATTCAGTGGGTTCTTTATCAACAGGGATAGGATCCCCAGTTATTGGATTTGGTTCCATTACTTGTCGTTGGTTAAGTATCCTTATGAAGCTGTTCTGCAGAACGAGTTTGATGACCCAGTGAAGTGCTTTGTGAGAGGGGTGCAGATTTTCGACAATACCCCTCTTGGTTCCGTGCCTGGTGCCCTCAAGTTGAAGCTGTTGGAGAGCATGAGCAATACTCTGGGAATGAACATCACGAGCTCCACGTGTTTGACAACGGGTTCTGATATATTGCAACAGAATGGGGTGACGGATTTGAGCAAATGGAACTGTTTGTGGATCACCGTGGCTTGGGGTTTCTTCTTCAGGTTTCTCTTCTACTTGTCTTTGTTGGTGGGCAGCAAGAACAAGAGGAGGGGAAGAATACAGGCCTATTCCCTACTATCAGAATACTTTCAAGCAACTAGGCATCATGATCATTCTACTCTTCCTAGAATTACAAGCAAAAATGTTGGCTTACACCGGAAGCCTCCTCCTGAGGGCTTGGTCAAATGTAACTCGGATGCGGCTTGGGAAGATCCATGCACCTTCCCCCTAATTGCGAAAGCTCTTGCCGAGAGGTTAGTACCTGAAATCCAGCCGATTGTAGAAGACATCCTCTCAGTTGCTTCTGGTTTTGTGCATTGTGGCTTCACATGGGTTCAAAGAAAGGGCAACAAGGCGGCGCACATGATAGCTCAATCCTGCCTCAACAATTCTCTCCATGTCTACTGGAATGCCTCAATCCCTTCATGGCTCCGAGAACAACTCTTCCGTGACTTTCCTCCATCTCGACCTTGA 2244 0.4991 MAVLGASGSGKSTLIDALANRIAKGRLKGRVALNGEALESRLLKVISAYVMQDDLLFPMLTVEETLNFAAEFRLPRTLSKSKKKARVQALIDQLGLRNAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAFMVVKVLQRIAQSGSIVIMSVHQPSYRILGLLDRMIFLSRGQTVYSGSPLQLPLFFAEFGHPIPESDNRTEFALDLIRELEGSPGGTKSLVEFNKSWQSMTKLHPVDASEQRNGMSLKEAISASISRGKLVSGATNTNTNPSSMVPTFANPFWIEMATLSKRSFTNSRRMPELFGIRLGAVMVTGFILATMFWQLDNSPKGVQERLGFFAFAMSTTFYTTADALPVFLQERYIFMRETAYNAYRRSSYLVSHALVALPSLVFLSLAFAATTFWAVGLDGGVSGFLFYFLIIFASFWAGNSFVTFLSGVVPHVMLGYTIVVAILAYFLLFSGFFINRDRIPSYWIWFHYLSLVKYPYEAVLQNEFDDPVKCFVRGVQIFDNTPLGSVPGALKLKLLESMSNTLGMNITSSTCLTTGSDILQQNGVTDLSKWNCLWITVAWGFFFRFLFYLSLLVGSKNKRRGRIQAYSLLSEYFQATRHHDHSTLPRITSKNVGLHRKPPPEGLVKCNSDAAWEDPCTFPLIAKALAERLVPEIQPIVEDILSVASGFVHCGFTWVQRKGNKAAHMIAQSCLNNSLHVYWNASIPSWLREQLFRDFPPSRP 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi26g00223 747 Pfam ABC transporter 2 140 IPR003439 GO:0005524
Sebi26g00223 747 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 199 IPR027417 -
Sebi26g00223 747 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1 212 IPR003439 GO:0005524
Sebi26g00223 747 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 1 595 - -
Sebi26g00223 747 Pfam ABC-2 type transporter 305 511 IPR013525 GO:0016020|GO:0140359
Sebi26g00223 747 Gene3D - 1 201 IPR027417 -
Sebi26g00223 747 SMART AAA_5 1 189 IPR003593 GO:0016887
Sebi26g00223 747 FunFam ABC transporter G family member 6 1 203 - -
Sebi26g00223 747 ProSitePatterns ABC transporters family signature. 112 126 IPR017871 GO:0005524|GO:0016887
Sebi26g00223 747 Pfam ABC-2 type transporter 169 246 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi26g00223 Sebi-Chr26 3024174 3027657 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi26g00223 1 172 Calmodulin-binding Proteins AT2G36910 30.286 2.76e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi26g00223 K05681 - gmx:100803658 1098.57