Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi26g00181 ATGGAAGAGATAGGTTCGGGGACAGCAATAAACCCTTCCAATATAGGGTTTCAGCTATTGAAGAAGCATGGTTGGAAAGAAGGAACTGGTCTTGGGATCTCTGAGCAGGGTAGATTAGAACCCGTGGAAACTCATGTGAAGAATAACAAACGAGGTTTGGGAGCGGATCAAGTGAAGAAAAAGGCCGTGAAGCCTGATCATAGTGATACCTCTAAAGGGAACAAAAAGCAGGGAAAGAAAACCAAATCACTTTCTAAACGGATGAGAAAGATGCAGGAGTATGAAAAGAAGATGCAAGAGAAGGAATTTGAGCGCGCATTCTTTAGAGAGTTCTGGCCAGAAAATGTGTAA 351 0.4274 MEEIGSGTAINPSNIGFQLLKKHGWKEGTGLGISEQGRLEPVETHVKNNKRGLGADQVKKKAVKPDHSDTSKGNKKQGKKTKSLSKRMRKMQEYEKKMQEKEFERAFFREFWPENV 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi26g00181 116 ProSiteProfiles G-patch domain profile. 12 58 IPR000467 GO:0003676
Sebi26g00181 116 SMART G-patch_5 10 56 IPR000467 GO:0003676
Sebi26g00181 116 Coils Coil 84 104 - -
Sebi26g00181 116 Pfam G-patch domain 13 55 IPR000467 GO:0003676
Sebi26g00181 116 PANTHER BAT4 PROTEIN-RELATED 6 116 IPR039146 -
Sebi26g00181 116 MobiDBLite consensus disorder prediction 28 95 - -
Sebi26g00181 116 MobiDBLite consensus disorder prediction 40 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi26g00181 Sebi-Chr26 2527541 2529102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi26g00181 1 54 C2H2 Transcription Factor Family AT5G26610 44.444 1.59e-09 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi26g00181 - - cam:101497292 169.474