Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi26g00164 ATGTCTCAGACATCCAGTGTCCCGCCTGTGTTCCAGTCTATCAAATCATTGCCTCCTGAGTTCAAGTTTACTAATAATCCAAACGCTGGTCTTGTGGCAAAACATGGAAATATTAAACTGAGAAGCACTGATCTGATTGGATCAAACGGTCTTGAAAATGGTGCACTAGGAGGATTGGTTTCTAAGGAAGTTCACAGCCGAGGTGGTGACATGGATCTTTTTGATGAGGAATCGCCATATGGCGGAAAAGGTAGATCATTTGATGACAGGCCAACAAATGCTGATGAAGACTCGGTTTCTGATTCGTTGCCCCTCCCATCAATTTCAACATCCTCTAGAGAAAGCAGATGGAGTGATACAACTCCTTATGCTTCAAAGAAGAAGCTTCAGTCTTGGCTTCAACTTTCTAATGGGGATTGGGAGCTGGTGAAGATAATATCCACTTCTGGAACAGAGTCTATCATTTCACTGCCTGATGGGAAAGTTTTAAAGGTGAAAGATGAAAATTTGGTGCCGGCAAATCCCGATATTCTTGATGGAGTGGATGATCTCATGCAACTTAGTTATTTAAACGAACCGTCAGTTTTATACAACCTGCAATATAGATACAATCAAAATATGATCTATACAAAAGCAGGGCCTGTTTTGGTTGCCATAAATCCCTTTAAGAAAGTTCCTCTTTATAGTAATGACTATATTGAAGCCTACAAACGTAAAGCAATTGAAAGCCCTCATGTATATGCAATTACAGACACAGCCATCAGAGAAATGATACGGGATGAAGTTAATCAATCAATAATTATAAGCGGCGAGAGTGGAGCAGGGAAGACCGAGACAGCAAAAATAGCAATGCAGTACTTGGCTGCCCTTGGTGGTGGAAGTGGAATTGAGTATGAGATATTAAAGACTAATCCAATACTTGAAGCCTTTGGTAATGGCAAAACATTGAGAAATGACAACTCAAGTCGTTTTGGAAAGCTCATTGAGATTCACTTCAGCGAAACTGGAAAAATATCTGGTGCAAATATTCAAACATCTATGTGCTGGAGCACCACCATCTCTAAGGGGAAAAAAGTTGAAGAAAAGGAAAACCCACAAGCTCATAAGGATGATCAGCTGGAAGCTCTGGATGTTGTCCACATTAGCAAAGAAGACCAGGAGAATGTATTTGCAATGCTTGCCGCAGTATTATGGTTAGGAAACATATCATTTACTGTGATCGATAATGAAAATCATGTTCAAGCTGTTGAGGATGAGGGGCTGTTCAGCGCTGCCAAGTTGATTGGTTGTGACATTGAAGATCTGAAGTTGACTTTATCAACTCGCAAAATGAAAGTTGGTAATGATATCATTGTGCAGAAGTTGACACTGTCTCAGGCTATTGATGCGAGAGATGCTTTGGCGAAGTCAATATATGCATGTCTGTTTGATTGGCTGGTTCAACAAATAAACAAATCACTTGCTGTTGGCAAAAGACGCACTGGCAGATCTATCAGTATTCTGGATATTTATGGCTTTGAGTCGTTCAATAGGAACAGTTTTGAGCAGTTCTGCATAAATTATGCAAATGAAAGATTGCAGCAACACTTTAATCGTCATTTATTCAAGTTAGAACAAGAGGAGTATATCCAAGACGGCATTGATTGGACTAAAGTTGAATTTGAAGACAACCAAGACTGCCTTAATCTTTTTGAAAAGAAACCACTGGGGCTGCTATCTCTGTTAGATGAAGAGTCCACTTTCCCAAATGGCACAGATTTAACATTTGCTAACAAGCTTAAGCAGCATTTGAATTCTAATTCATGCTTCAAAGGAGAACGAGAAAAAGCCTTTACTGTGTGTCATTATGCAGGGGAGGTCACTTATGATACAACTGGATTCCTGGAGAAGAACAGGGACCTATTGCACTTGGATTCCATCCAACTTCTATCTTCAAGCAAATGTCATCTTCCTCAGATATTTGCATCCCATATGCTTACTCAGTCTGAGAAGCATGTAGTTGGTCCCTTACACAAGTCAGGTGGGGCAGATTCCCAAAAGCTAAGTGTAGCCACAAAATTCAAGGGACAATTGTTTCAACTGATGCAACGTTTAGAAAATACCACACCACATTTTATTCGCTGCATTAAGCCCAATAACCTCCAATCACCTGGATCATATGAGCAAGGCCTTGTACTGCAGCAGTTGAGATGTTGTGGGGTCCTGGAAGTGGTTCGAATATCAAGATCGGGCTTTCCAACTAGAATGTCTCACCAAAAGTTTGCCAGAAGATATGGCTTTCTTCTCCTTGAAAATGTCGCATCCCAGGATCCACTCAGTGTTTCAGTTGCGATTCTTCATCAGTTTAACATTTTGCCTGAGATGTATCAAGTTGGCTACACGAAATTATTCTTCCGAACAGGGCAGATTGGGGTGCTTGAAGATACTAGAAATCGTACCCTCCATGGCATTTTACGTGTGCAAAGTTGCTTCAGGGGTTACCAAGCTCGTCGTCATCGCAGGGAGCTTTGGAGAGGAATCACTACTCTTCAGTCATATATTAGGGGAGAGAAAAACAGAAAGGAATATGCAGCTGTGCTTCAGAGACATAGAGCTGCTGTTATTATACAGAAGCGGATGAAAACAGTATTTGCAAGAAACAGATTGAAGAATATCAATGACGCTGCAGTTGTTATACAATCATTTATTCGCGGCTGGTTAGTCAGAAGATGCTCAGGAGATATAGGATTGTTAAAATCCGGAGGCATGATGACAAATGAGTCAGATGAGGTTCTGGTGAAGTCGTCTTTCCTAGCTGAATTGCAGCGCAGGGTACTTAAGGCTGAAGCTGCCCTGAGAGAGAAAGAAGAGGAAAATGACATCCTTCACCAACGTCTTCAACAGTATGAGAGCAGATGGTCTGAATATGAATTAAAGATGAAATCCATGGAAGAAGTATGGCAAAAACAAATGAGATCTCTACAATCTAGCCTCTCCATTGCAAAGAAGAGCCTTGCTATGGATGATTCTGAAAGAAATTCAGATGCATCTGTTAATGCAAGTGATGAGAGGGACTACAGCTGGGATATAGGAAGTAATCACAGGCGCCAAGAAAGCAATGGAACAAGATCTATGAGTGCTGGTTTGAGTGTTATAAGTAGGTTGGCTGAAGAATTTGAGCAAAGGAGTCAAGTATTTGGTGATGATGCCAAGTTCTTGGTTGAGGTAAAATCTGGTCAAGTTGAAGCAAGTTTGGACCCAGACCGAGAGCTTAGAAGGTTAAAACAGATGTTTGAAGCTTGGAAAAAGGATTATGGCGCAAGACTGCGTGAAACAAAGGTTATTTTACATAAACTCGGAAGTGATGGTTCAATTGAGAAAGCAAAGAAAAAGTGGTGGGGAAGAAGAAATAGTACAAGGATAAATTGA 3408 0.4082 MSQTSSVPPVFQSIKSLPPEFKFTNNPNAGLVAKHGNIKLRSTDLIGSNGLENGALGGLVSKEVHSRGGDMDLFDEESPYGGKGRSFDDRPTNADEDSVSDSLPLPSISTSSRESRWSDTTPYASKKKLQSWLQLSNGDWELVKIISTSGTESIISLPDGKVLKVKDENLVPANPDILDGVDDLMQLSYLNEPSVLYNLQYRYNQNMIYTKAGPVLVAINPFKKVPLYSNDYIEAYKRKAIESPHVYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNGKTLRNDNSSRFGKLIEIHFSETGKISGANIQTSMCWSTTISKGKKVEEKENPQAHKDDQLEALDVVHISKEDQENVFAMLAAVLWLGNISFTVIDNENHVQAVEDEGLFSAAKLIGCDIEDLKLTLSTRKMKVGNDIIVQKLTLSQAIDARDALAKSIYACLFDWLVQQINKSLAVGKRRTGRSISILDIYGFESFNRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWTKVEFEDNQDCLNLFEKKPLGLLSLLDEESTFPNGTDLTFANKLKQHLNSNSCFKGEREKAFTVCHYAGEVTYDTTGFLEKNRDLLHLDSIQLLSSSKCHLPQIFASHMLTQSEKHVVGPLHKSGGADSQKLSVATKFKGQLFQLMQRLENTTPHFIRCIKPNNLQSPGSYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLENVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRTGQIGVLEDTRNRTLHGILRVQSCFRGYQARRHRRELWRGITTLQSYIRGEKNRKEYAAVLQRHRAAVIIQKRMKTVFARNRLKNINDAAVVIQSFIRGWLVRRCSGDIGLLKSGGMMTNESDEVLVKSSFLAELQRRVLKAEAALREKEEENDILHQRLQQYESRWSEYELKMKSMEEVWQKQMRSLQSSLSIAKKSLAMDDSERNSDASVNASDERDYSWDIGSNHRRQESNGTRSMSAGLSVISRLAEEFEQRSQVFGDDAKFLVEVKSGQVEASLDPDRELRRLKQMFEAWKKDYGARLRETKVILHKLGSDGSIEKAKKKWWGRRNSTRIN 1135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi26g00164 1135 PRINTS Myosin heavy chain signature 550 578 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi26g00164 1135 PRINTS Myosin heavy chain signature 209 228 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi26g00164 1135 PRINTS Myosin heavy chain signature 305 332 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi26g00164 1135 PRINTS Myosin heavy chain signature 263 288 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi26g00164 1135 Gene3D Kinesin motor domain 182 347 IPR036961 -
Sebi26g00164 1135 MobiDBLite consensus disorder prediction 97 120 - -
Sebi26g00164 1135 Gene3D - 359 380 - -
Sebi26g00164 1135 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 126 175 IPR004009 GO:0003774|GO:0005524|GO:0016459
Sebi26g00164 1135 SMART iq_5 812 834 IPR000048 GO:0005515
Sebi26g00164 1135 SMART iq_5 861 883 IPR000048 GO:0005515
Sebi26g00164 1135 SMART iq_5 835 857 IPR000048 GO:0005515
Sebi26g00164 1135 SMART iq_5 884 906 IPR000048 GO:0005515
Sebi26g00164 1135 ProSiteProfiles IQ motif profile. 815 842 IPR000048 GO:0005515
Sebi26g00164 1135 Pfam Myosin head (motor domain) 181 345 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi26g00164 1135 Pfam Myosin head (motor domain) 370 799 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi26g00164 1135 Gene3D - 863 905 - -
Sebi26g00164 1135 Gene3D - 815 862 - -
Sebi26g00164 1135 ProSiteProfiles IQ motif profile. 838 865 IPR000048 GO:0005515
Sebi26g00164 1135 SMART MYSc_2a 173 812 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi26g00164 1135 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 857 IPR027417 -
Sebi26g00164 1135 Coils Coil 931 979 - -
Sebi26g00164 1135 FunFam Unconventional myosin-XIX 509 701 - -
Sebi26g00164 1135 Gene3D Myosin VI head, motor domain, U50 subdomain 382 679 - -
Sebi26g00164 1135 Gene3D - 507 701 - -
Sebi26g00164 1135 ProSiteProfiles Myosin motor domain profile. 179 811 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi26g00164 1135 Pfam IQ calmodulin-binding motif 817 832 IPR000048 GO:0005515
Sebi26g00164 1135 Pfam IQ calmodulin-binding motif 839 856 IPR000048 GO:0005515
Sebi26g00164 1135 Pfam IQ calmodulin-binding motif 887 903 IPR000048 GO:0005515
Sebi26g00164 1135 MobiDBLite consensus disorder prediction 998 1012 - -
Sebi26g00164 1135 MobiDBLite consensus disorder prediction 998 1037 - -
Sebi26g00164 1135 MobiDBLite consensus disorder prediction 70 96 - -
Sebi26g00164 1135 MobiDBLite consensus disorder prediction 70 120 - -
Sebi26g00164 1135 Gene3D - 744 812 - -
Sebi26g00164 1135 Gene3D Kinesin motor domain 492 740 IPR036961 -
Sebi26g00164 1135 PANTHER MYOSIN 370 1126 - -
Sebi26g00164 1135 CDD MYSc_Myo8 193 799 IPR036022 -
Sebi26g00164 1135 ProSiteProfiles IQ motif profile. 885 914 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi26g00164 Sebi-Chr26 2250483 2264892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi26g00164 7 1133 Myosins gene family AT1G50360 72.246 0.0 1675
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi26g00164 - - gmx:100801124 1964.89