Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi26g00149 ATGGTGATGGTGGTGATGGAGGACAACGAAAGCTGCGGCAGCGGAGTGCAGCACCGCACGACGATGTCGTCTCCGGCGCAAAACCGGCAACAGCGGCAGAAGATGGAAGTGTACAATGAGATTCTTCGCCGGCTTAAGGATTCCGGCAACGAAGAGGCTATGCAACCTGGCTTCAACGATCAGCTTTGGACTCACTTCAACCGTCTTCCTACACGGTATGCGTTGGATGTGAATGTGGAAAGGGCGCAAGATGTTCTTATGCACAAGAGATTACTGTATCTGGCACATGATCCTGCTAATAGGCCTTCAATGGAAGTTCGCTTAGTTCAGGTTCATCCCATATCTGACAGAAACTCAGCTGATTCTTTTCAAACAGATGCTCCTGGGATAGAATCTAGTGAAAGCTCTTCAAAGTACTCAAGCAGACAGAGTATACACCCACCTCCTGCTTTTGGTTCTTCTCCTAATCTTGAAGCACTGGCTCTTGAAGCAAATAATTCTGAAGGCATAGAGGAGGATCGATCTGTACATGCCAGTGTACAATATTCACGGCCCATGCATGAAATCACCTTCTCAACAGATGACAAGCCAAAGCTTCTCAGCCAGTTAACTGCTTTGCTTGCTGAGATTGGACTGAACATCCAAGAGGCGCATGCCTTTTCCACAACTGATGGTTACTCATTAGATGTGTTTGTTGTTGAAGGATGGCCCTATGAGGAAACAGAGAGGCTAAAAGCAGCTTTGGAAAAAGAAGTCTTGAAGATTGAGAGACAGGTGAGGTCGAATCAGCAATCAGTATCGTCTGTTAAGCAGCCTGACCAAGCAATGGTCAAACATGAACTGGATCATCTTGCAATTCCAAATGACGGGACAGATGTTTGGGAAATAGATCCTAAACATTTGAAATATGGAACTCAAATTGGATCTGGGTCATATGGTGATCTCCAGGAAGTAGCCATCAAAATTCTCAAGGCTGAACATGTAAATTCAGAAATGCAGAGAGAGTTCGCACAGGAAGTTTATATCATGAGAAAGGTTCGACACAAGAATGTTGTACAATTCATAGGAGCATGTACCAAGCCTCCACGCTTATGCATAGTAACAGAATTTATGTCTGGTGGAAGTGTGTATGACTACCTACATAAGCAGAGGGGTTTTTTTAAATTTCCTACCCTGCTCAAAGTTGCAATTGATGTTTCTAAAGGAATGAACTACTTGCACCAACATAACATAATCCATAGAGACTTGAAGGCTGCAAATCTTTTGATGGATGAAAATGGTATTGTAAAGGTCGCTGATTTTGGGGTTGCCAGAGTGAAATCTCAATCTGGAGTTATGACAGCAGAAACTGGGACATATCGATGGATGGCTCCTGAGGTTATAGAACACAAACCGTATGATCACAAGGCTGACGTATTCAGTTTTGGAATTGTTTTATGGGAGTTGCTCACTGGAAAGCTTCCATATGAATATTTGACCCCTCTACAGGCAGCTATAGGAGTGGTTCAAAAGGGTCTACGGCCTACTATCCCCAAGAACACTCATCCAAAGTTTGTTGAGCTTCTTGAGAGGTCTTGGCAACAAGATCCAACATTGAGACCTGATTTCTCTGAAATTATCGAGATCCTGCAGCAGATAACTAAGGAGGTTGGAGATGAAGGAGAGGAGCGGCGTAAGGATAAATCGGGAGGACTTCTGTCTGTCCTCAGACGAGGTCATCACTAA 1725 0.4417 MVMVVMEDNESCGSGVQHRTTMSSPAQNRQQRQKMEVYNEILRRLKDSGNEEAMQPGFNDQLWTHFNRLPTRYALDVNVERAQDVLMHKRLLYLAHDPANRPSMEVRLVQVHPISDRNSADSFQTDAPGIESSESSSKYSSRQSIHPPPAFGSSPNLEALALEANNSEGIEEDRSVHASVQYSRPMHEITFSTDDKPKLLSQLTALLAEIGLNIQEAHAFSTTDGYSLDVFVVEGWPYEETERLKAALEKEVLKIERQVRSNQQSVSSVKQPDQAMVKHELDHLAIPNDGTDVWEIDPKHLKYGTQIGSGSYGDLQEVAIKILKAEHVNSEMQREFAQEVYIMRKVRHKNVVQFIGACTKPPRLCIVTEFMSGGSVYDYLHKQRGFFKFPTLLKVAIDVSKGMNYLHQHNIIHRDLKAANLLMDENGIVKVADFGVARVKSQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAIGVVQKGLRPTIPKNTHPKFVELLERSWQQDPTLRPDFSEIIEILQQITKEVGDEGEERRKDKSGGLLSVLRRGHH 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi26g00149 574 CDD STKc_MAP3K-like 307 543 - -
Sebi26g00149 574 FunFam Kinase suppressor of Ras 1 291 371 - -
Sebi26g00149 574 Coils Coil 238 265 - -
Sebi26g00149 574 ProSiteProfiles ACT domain profile. 188 267 IPR002912 -
Sebi26g00149 574 MobiDBLite consensus disorder prediction 13 33 - -
Sebi26g00149 574 PRINTS Tyrosine kinase catalytic domain signature 405 423 IPR001245 GO:0004672|GO:0006468
Sebi26g00149 574 PRINTS Tyrosine kinase catalytic domain signature 470 492 IPR001245 GO:0004672|GO:0006468
Sebi26g00149 574 PRINTS Tyrosine kinase catalytic domain signature 514 536 IPR001245 GO:0004672|GO:0006468
Sebi26g00149 574 PRINTS Tyrosine kinase catalytic domain signature 368 381 IPR001245 GO:0004672|GO:0006468
Sebi26g00149 574 PRINTS Tyrosine kinase catalytic domain signature 451 461 IPR001245 GO:0004672|GO:0006468
Sebi26g00149 574 Coils Coil 28 48 - -
Sebi26g00149 574 MobiDBLite consensus disorder prediction 10 33 - -
Sebi26g00149 574 SUPERFAMILY ACT-like 186 253 IPR045865 -
Sebi26g00149 574 Gene3D Phosphorylase Kinase; domain 1 291 372 - -
Sebi26g00149 574 Gene3D Transferase(Phosphotransferase) domain 1 373 564 - -
Sebi26g00149 574 ProSitePatterns Serine/Threonine protein kinases active-site signature. 411 423 IPR008271 GO:0004672|GO:0006468
Sebi26g00149 574 Pfam Protein tyrosine and serine/threonine kinase 315 543 IPR001245 GO:0004672|GO:0006468
Sebi26g00149 574 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 118 553 - -
Sebi26g00149 574 CDD ACT_TyrKc 186 253 - -
Sebi26g00149 574 MobiDBLite consensus disorder prediction 550 574 - -
Sebi26g00149 574 Gene3D - 186 258 - -
Sebi26g00149 574 MobiDBLite consensus disorder prediction 117 155 - -
Sebi26g00149 574 MobiDBLite consensus disorder prediction 117 150 - -
Sebi26g00149 574 ProSiteProfiles Protein kinase domain profile. 301 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi26g00149 574 SUPERFAMILY Protein kinase-like (PK-like) 292 547 IPR011009 -
Sebi26g00149 574 FunFam serine/threonine-protein kinase HT1 373 563 - -
Sebi26g00149 574 SMART serkin_6 301 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi26g00149 574 MobiDBLite consensus disorder prediction 550 567 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi26g00149 Sebi-Chr26 1925020 1932980 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi26g00149 7 573 MAP Kinase Kinase Kinase AT4G35780 64.870 0.0 737
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Sebi26g00149 PK_Tyr_Ser-Thr 2.5e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi26g00149 - - gmx:100805180 1005.74