Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi26g00131 ATGCTGGTAACATTCAATGATTGGCGTACAACTGTAGCATTTGTTGGAGTTTCAAATTTTAATGAAAGTGGGACGGCTTGTCAGACACAAGAGTCATTTATCCACAATGATGGACAAGCAATACAGGGTGGTTGCAATGATTGTCATGTTCCGTATGAGCATATGGATGAGAATGAGGATAATGGATCTGCTAGTTTTCATGGTGAAGGAAGTTCAAATGACTCTGATGAAGAATTAGAGAATATGAATGAAGACGAAGTTAATAGTGAAGATGTGTCTGAAGATGGTGAAGAAGAACATACAGAAAGTACTGGACCTGGCTCAAACGACAAAGATAATGAGATGAATAATAGTGAAGGTGAAGGGGAGTCTAGTGATGAAGATCGTAAACATGATTCCAATGATAGGAATGACATTCCCATTGAAAGTGAAGAGGAATTTGGAAATATTGACTTCAAGAGCTTAACATCGAGTGATCTAATGAAGTACCACTTTCCTGATCGTGAGGTTTCTTTCGATTTCTATAGTTGGTATGCCAGATTCCATGGCTTCGCTGCTCGGAAGGAAAGGACAGTGCATAATAAGAAGGATGAAGTAATTCGGCAAACATTTGTTTGCTATAGGGAAGGTGGAAAAATACCCGACCAAAGACCTTTGAAGCGTGCCCCTAGGAAGAAAACGAGGTGTGGATGTCTAGCTAGTTGTCAAGTGCCCATATGGTCTACTAATAACCGGTGGAAGATGAGTGAAGATGATGTAGTCCAAATGATGAACATGCGAAAGGTGGGGATTAGGACTCCACACATATATGGTTCGTTTTCTAGCCAAATGGGAGGATATGAAAATGTTAGATTCAGGAAAAAGGACATGTACAATGAAATAGACAAGCTTAGGCGGAAGAAAGGGTCAGATGCGACAACTGCTTTGTCATACTTACAACGTTTGAAAAGGACTCATCAAGCATTGCATTGGAGGCACACTAGTGATGAGCATGGTAGGCTACAACACCTTTTCTGGACAACATCGCGTGTTGAAGGTCTACATGCTTTGCTTGGGAAGTTTGTCAATAGTCGCAATAACTTGAGTGAGTTCTTAGAGCACTACCAGCGATGCCTAAGTCAAATGCGGTTCAAAGAAATTGAAGCGGACTTCGATTCAGTTCATGGGGAACAACAGTTGCAAACACAATTAAGTACATTAGAAAAGTTTGCAGCAAGGGTTTATACGAAAGAAATATTTTTGATGTTCCGATTAGTGTTGTTAAGTGCAACCAGGGTCATGGTTACATCACAAAAAAGAAGTGGATCTGGGTTCATTTACTTTGTCTCCAAGTATAGAAGACCAACCAAAGAGTGGCACGTCTTCTTCTGGCCATCTACTATGGAGTTGAAGTGCTCTTGCATGAGGATGGAGTCACTTGGGATACCATGTGACCACTTAGTGGCTGTAATTGTGTACTTAGATATGACTGAAATCCCTAAATGTTTGTTGCTTGATAGGTGGACTATGTGTGCTAAGGAGTCAATAGACCAAGGGCAATCTGTAACCTGGGATCCGCCGCAGGTGTGTCAAACATAG 1578 0.4113 MLVTFNDWRTTVAFVGVSNFNESGTACQTQESFIHNDGQAIQGGCNDCHVPYEHMDENEDNGSASFHGEGSSNDSDEELENMNEDEVNSEDVSEDGEEEHTESTGPGSNDKDNEMNNSEGEGESSDEDRKHDSNDRNDIPIESEEEFGNIDFKSLTSSDLMKYHFPDREVSFDFYSWYARFHGFAARKERTVHNKKDEVIRQTFVCYREGGKIPDQRPLKRAPRKKTRCGCLASCQVPIWSTNNRWKMSEDDVVQMMNMRKVGIRTPHIYGSFSSQMGGYENVRFRKKDMYNEIDKLRRKKGSDATTALSYLQRLKRTHQALHWRHTSDEHGRLQHLFWTTSRVEGLHALLGKFVNSRNNLSEFLEHYQRCLSQMRFKEIEADFDSVHGEQQLQTQLSTLEKFAARVYTKEIFLMFRLVLLSATRVMVTSQKRSGSGFIYFVSKYRRPTKEWHVFFWPSTMELKCSCMRMESLGIPCDHLVAVIVYLDMTEIPKCLLLDRWTMCAKESIDQGQSVTWDPPQVCQT 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi26g00131 525 Coils Coil 280 300 - -
Sebi26g00131 525 MobiDBLite consensus disorder prediction 114 145 - -
Sebi26g00131 525 PANTHER OS01G0519700 PROTEIN 358 509 - -
Sebi26g00131 525 Pfam FAR1 DNA-binding domain 173 249 IPR004330 -
Sebi26g00131 525 MobiDBLite consensus disorder prediction 75 98 - -
Sebi26g00131 525 ProSiteProfiles Zinc finger SWIM-type profile. 440 488 IPR007527 GO:0008270
Sebi26g00131 525 MobiDBLite consensus disorder prediction 56 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi26g00131 Sebi-Chr26 1696370 1698780 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi26g00131 FAR1 5.8e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi26g00131 - - tpra:123905832 221.09