Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi26g00114 ATGACTTGGAAAAAACGTGATGCTGAAGTGGTTTGGTTAGGCAATAATTGGAAGAAATTTGCAAAATTTTATTCTTTGGATCATCAACATCTTTTGATGTTCAAATACGAAAGGAAGTCACAGTTTCAGGTTGTGATATGTGATCAAAGTTTCTTGGAAATAGGGTACCCTGTGTTCATTGGAACCTTTGGTGTTGAAGAAATCAGTGATCAGAGTGGCAACTCGAGAGAAATTTTTGATGGTTTTTCAACTCCCCGAAATAAAAGGCCAAATTCTTCTCCCCAAACTGAAAGAGTTCTTGAGCCAAAAAGTACAGGTCAAAGACAAAACATGACGGGAGGCTCAAAATCTCAGGCTATTGAAAGTGAGGAGCCGTTACAAAATACTAAAAGTAGCATTGCATTGAAGAGAGCCCATGCATATCACACTGAGAACCCCTCCTTCATTCGTGAAATGCACCCATCACACATTGGAAGAAATTTTCTGCCACTACCTCCCAGGTTTTTAACAGCAAGTGAACAAAGGGTGGAGAGTGCTACTCTTTGGGTTTCTGAGGAGAGAACTTGGGATGTTAAGTTAAATCTGAATCATTCCAATGGCCAAATATCGCTTAAAACTGGTTGGAAGAATTTTGTAAAGGACAATCATTTGAAACTTGGTGATGTTTGTGTTTTTGAGCAAATTAAGTCAGCAGGAGTTTCATTTAGAGTTGTTATTTTTCGTGACGGAGAAGAATTAAGCCCTCCCCAGTTTCAAGTAATCCGAAAGAAAAGGACAGGGGCTCAAAGTAACATCCCTCAAAAGGAAGGGGTTGATGGAAATGCCCAAAAGTGCTCAACAACAACAACTAATGTCTTTGATGGTCTACTTATTATTTTCCCCTTTTTTGAATGGTTATTCTGA 903 0.3887 MTWKKRDAEVVWLGNNWKKFAKFYSLDHQHLLMFKYERKSQFQVVICDQSFLEIGYPVFIGTFGVEEISDQSGNSREIFDGFSTPRNKRPNSSPQTERVLEPKSTGQRQNMTGGSKSQAIESEEPLQNTKSSIALKRAHAYHTENPSFIREMHPSHIGRNFLPLPPRFLTASEQRVESATLWVSEERTWDVKLNLNHSNGQISLKTGWKNFVKDNHLKLGDVCVFEQIKSAGVSFRVVIFRDGEELSPPQFQVIRKKRTGAQSNIPQKEGVDGNAQKCSTTTTNVFDGLLIIFPFFEWLF 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi26g00114 300 CDD B3_DNA 146 241 IPR003340 GO:0003677
Sebi26g00114 300 Gene3D - 126 244 IPR015300 -
Sebi26g00114 300 MobiDBLite consensus disorder prediction 74 129 - -
Sebi26g00114 300 SUPERFAMILY DNA-binding pseudobarrel domain 7 56 IPR015300 -
Sebi26g00114 300 PANTHER B3 DOMAIN-CONTAINING 146 246 - -
Sebi26g00114 300 ProSiteProfiles B3 DNA-binding domain profile. 147 243 IPR003340 GO:0003677
Sebi26g00114 300 SUPERFAMILY DNA-binding pseudobarrel domain 141 241 IPR015300 -
Sebi26g00114 300 ProSiteProfiles B3 DNA-binding domain profile. 1 50 IPR003340 GO:0003677
Sebi26g00114 300 Pfam B3 DNA binding domain 150 241 IPR003340 GO:0003677
Sebi26g00114 300 SMART B3_2 148 243 IPR003340 GO:0003677
Sebi26g00114 300 Gene3D - 1 51 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi26g00114 Sebi-Chr26 1535019 1536281 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi26g00114 11 241 B3 DNA Binding Superfamily AT3G18990 23.509 1.45e-10 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Sebi26g00114 B3 1.4e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi26g00114 - - aprc:113871918 226.868