Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi26g00110 ATGGCGGAACAGACGGAGAAAGCTTTCCTGAAGCAACCCAAGGTTTTCTCTGCTCGAAGAAATCCGGGAAGGGGAAGAGGCCTGGAAAAGGAGGGAACAGGTTTTGGAAGAGTATTGGATTGGGATTCAAGACTCCCAGAGATGCAATTGAAGGGACTTACATTGATAAGAAATGCCCATTCACTGGCACTGTTTTCCGTCCGTGGTCGCATTCTTGCTGGCACTTGCCATAGTGCCAAAATGACAAGGACTATCATTGTCCCGGCGTACGAGAAGAGGCACTCAAATATTCCAGCACATATATCTCCATGTTTCCGTGTGAAGGAAGGAGATCATGTTATTATTGGGCAGTGCAGGTTGGTTGCTGACTCCCCAATCCTGTGA 384 0.4792 MAEQTEKAFLKQPKVFSARRNPGRGRGLEKEGTGFGRVLDWDSRLPEMQLKGLTLIRNAHSLALFSVRGRILAGTCHSAKMTRTIIVPAYEKRHSNIPAHISPCFRVKEGDHVIIGQCRLVADSPIL 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi26g00110 127 SUPERFAMILY Nucleic acid-binding proteins 68 119 IPR012340 -
Sebi26g00110 127 Pfam Ribosomal protein S17 89 121 IPR000266 GO:0003735|GO:0005840|GO:0006412
Sebi26g00110 127 PANTHER 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER 10 120 IPR000266 GO:0003735|GO:0005840|GO:0006412
Sebi26g00110 127 Gene3D - 1 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi26g00110 Sebi-Chr26 1500495 1501567 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi26g00110 1 124 Cytoplasmic Ribosomal Protein Gene Family AT5G23740 53.333 3.27e-38 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi26g00110 K02949 - twl:119982150 139.428