Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi26g00078 ATGCTTCTAGGGAAAAGCAGTGATGGAACCTTCCCCATTTTGTCACTCATCATCTTCAGCCCTTATCTCTACTTCGTTCGAATCTTCTCCACTCTTCGAAGACTCAGAAGTGGGGAACCTCCTTACACCCAAGTTCATGAGGGCCTCTATGTCGGTGGCTGGCCTTCTTCGCCGGAAAAGTTGCCGCCCGGTGACCCTGCCATCATTGACTGCACTTGTGAGTTTCCGAGGATGAAAGGGTTCTCTGGTGGGCTACCTTATATGTGCGTTCCAACTTGGGATACTAGGTCCCCTCAACCTGCTGATATTGAATCTGCTGTCAAGTGGGCTTGTCGAAAGAGGGAACTCAATAGGCCCATTTTTGTCCACTGTGCTTATGGTCATGGAAGAAGTGTTGCTGTTATGTGTGCACTGTTAGTGGCACTAGGTATCACAGAGGATTGGAAGAATGCTGAGAAGCTAATCAAGCAAAAACGCCCTTACATTCGGATGAATGCTCTCCATCGCAAGGCGCTTGAAGAATGGTCCAGACACCGATTATCTGTGCCAAAGAAGTAG 558 0.4857 MLLGKSSDGTFPILSLIIFSPYLYFVRIFSTLRRLRSGEPPYTQVHEGLYVGGWPSSPEKLPPGDPAIIDCTCEFPRMKGFSGGLPYMCVPTWDTRSPQPADIESAVKWACRKRELNRPIFVHCAYGHGRSVAVMCALLVALGITEDWKNAEKLIKQKRPYIRMNALHRKALEEWSRHRLSVPKK 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi26g00078 185 Gene3D Protein tyrosine phosphatase superfamily 42 180 IPR029021 -
Sebi26g00078 185 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 101 170 IPR000387 GO:0016311|GO:0016791
Sebi26g00078 185 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 26 180 IPR029021 -
Sebi26g00078 185 SMART dsp_5 41 178 IPR020422 GO:0006470|GO:0008138
Sebi26g00078 185 CDD DSP_bac 38 177 - -
Sebi26g00078 185 PANTHER - 1 184 - -
Sebi26g00078 185 Pfam Dual specificity phosphatase, catalytic domain 68 177 IPR000340 GO:0008138|GO:0016311
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi26g00078 85 177 Protein tyrosine phosphatase (PTP) family AT5G56610 30.526 1.04e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi26g00078 - - aprc:113873203 369.392