Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi26g00074 ATGGGATCCGAAGCTCTTGTTCCAAAATGGGCATCCAATCCTTGCATCATGGGAATCGACGAAGCTGGAAGAGGCCCTGTTCTAGGGCCCATGGTGTATGGTTGCTTGTACTGTTCTCGCTCTTACCAGAAGACCCTAGCTACTTTGAGTTTTGCAGATTCTAAAACACTAAAAGAAGAGAAGAGGGAAGAGTTATTTGAAGCTTTAAAAGCCAATGATTCTATTGGATGGGCTGTTGATGTCATTGACCCAAGGGAGCTCTCTGCTAAAATGCTCAAGAAGAATAAGATAAACTTGAATGAGATATCACATGACTCTGCAATGGGCCTCATCGACAGGGTACTAAAGATGGGAGTGCTTCTAGCTGAGGTTTATATAGATACAGTTGGAGATGCAGGGAAATATGAAATGAAGCTGTCTAAAAGTTTTCCATCTATCAAATTTGTGGTTGCAAAGAAGGCTGATAGTCTCTATCCTGTTGTCAGTGGTGCAAGCATAGTTGCAAAGGTCACAAGAGACCAAGCTTTAAGAGACTGGGTGCTTGATGAGACTGCTGAAAACATGCATAAGAACTTCGGCTCTGGATATCCTGGAGATCCTCATACCAAGTCTTGGCTAGAACACCACAAACATTCTATCTTTGGATTTCCAACATTGGTCCGATTTAGTTGGGGAACCTGCACCACTTATTTCAAAGATGTTGCAGAAGTCTTATGGGAGTCTGACAAATCGGATGAAGACGGTGGCTGCAATAATAGTGGCAAGCGGCAATTGAAATTAAGCAATGTAGGTTTCACCACATCCAAGAGGAGAAGTGAAGAAATAGAATCAAGTGGTAAAGGGCGCTGTAGACATGCACTTGCTAATCACGAGTCAGCAACTTATGCTCACATGGAATCTGTAAACTTGATTGGCTTTTTATGTTGCCAATTTGATGTTTTGAAAAAACAGTATGAGAGGATAGACAAAGGTCATCATAAGCATAGTGGAAAAGTTGATTTTGTTAAGGTTGCAACTGGCAGCACTGCGACGATTCTGATGTTGGCGATTTTTATTTGCAGCACCTGCTGCATAAATTGGTATAACTGCCCCACCTCCTGA 1101 0.4223 MGSEALVPKWASNPCIMGIDEAGRGPVLGPMVYGCLYCSRSYQKTLATLSFADSKTLKEEKREELFEALKANDSIGWAVDVIDPRELSAKMLKKNKINLNEISHDSAMGLIDRVLKMGVLLAEVYIDTVGDAGKYEMKLSKSFPSIKFVVAKKADSLYPVVSGASIVAKVTRDQALRDWVLDETAENMHKNFGSGYPGDPHTKSWLEHHKHSIFGFPTLVRFSWGTCTTYFKDVAEVLWESDKSDEDGGCNNSGKRQLKLSNVGFTTSKRRSEEIESSGKGRCRHALANHESATYAHMESVNLIGFLCCQFDVLKKQYERIDKGHHKHSGKVDFVKVATGSTATILMLAIFICSTCCINWYNCPTS 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi26g00074 366 CDD RNase_HII_eukaryota_like 17 233 - -
Sebi26g00074 366 NCBIfam ribonuclease HII 16 229 IPR004649 GO:0004523|GO:0016070
Sebi26g00074 366 SUPERFAMILY Ribonuclease H-like 15 232 IPR012337 -
Sebi26g00074 366 PANTHER RIBONUCLEASE H2 SUBUNIT A 5 282 IPR001352 GO:0003723|GO:0004523
Sebi26g00074 366 ProSiteProfiles Ribonuclease (RNase) H type-2 domain profile. 14 236 IPR024567 GO:0004523
Sebi26g00074 366 Gene3D Ribonuclease hii. Domain 2 187 236 IPR023160 GO:0004523
Sebi26g00074 366 FunFam Ribonuclease 2 186 - -
Sebi26g00074 366 Gene3D - 3 186 IPR036397 GO:0003676
Sebi26g00074 366 Pfam Ribonuclease HII 17 227 IPR024567 GO:0004523
Sebi26g00074 366 FunFam Ribonuclease 188 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi26g00074 Sebi-Chr26 1165990 1169866 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi26g00074 1 289 Core DNA Replication Machinery Family AT2G25100 66.436 5.68e-141 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi26g00074 K10743 - qsa:O6P43_004883 506.138