Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi26g00052 ATGGATAATAAAATAGGCTCTGTGTTTGGTGCAAAGTCGAGCAATGTCGCTGTTGTTGCAAGTAACTTGCAGTATGGGACATTCAACACTAACGTTGGGTCTGCTACAACAGGGGAAGTGTGCATTGAGACAGGTCAGCAGCCACTGTTCAACAAAGGAACCACTCTCGTTTCAGGGAACGAGAATTGGGGTGATTCAGGCATGGCAGAAAATAGTCAACAAACTGAAGATACTTCCACAGATATTGACGCTGATGATAAAAACCAATGTTTCTCAACGGGGTCGTGGTGCAATGGAGTTCGGCATGGGGCACTTGTAACTGTGGACTCCAAGGATCAAAGTAAGAGTAAGGTTAAAGCTGAAGACCAGAAGAGCCTTCGTAGGCTGGCCCAGAATCGGGAGGCTGCAAGGAAGAGTCGGTTAAGGAAAAAGGCATATGTGCAGCAATTGGAGAACAGTCGACTTAGACTTGCTCAAATAGAAGAAGAGCTTCAACGAACACGTCAGCAGGGTGTATTTATTGCAACTGGAATTGCGGGGGATCATGGTCATTCAGTTGTTGGAAATGGTGTGTTAGCATTTGATATGGACTATACCCGTTGGGTTGATGAGCATCAACGTCTGATCAATGACATAAGATCAGCTATGAATTCTCAAATGGGTGATAATGAACTGCAGCTTCTTGTTGATGGTGTCATGGCACACTATGATGAATTATATAGGTTGAAGAGCATAGGGGCAAAGGCTGATGTATTTCACATACTTTCCGGGCTGTGGAAGACACCTGCTGAAAGATGCTTCATGTGGCTTGGTGGATTCCGTCCATCTGAACTTCTCAAGATAGTTGGAAAACACCTTGAGCCCTTAACCGATCAGCAGTTGATGGGAATTTACAATCTGCAGCAGTCTTCTCAGCAGGCTGAGGATGCTTTATCTCAAGGCATGGAAGCATTGCAACAATCTCTTTCAGAGACACTTTCATCCACCTCCCTAGGACCTGCTGGTTCTGGAAATGTTGCTGAGTATATGGGCCAAATGGCAATTGCAATGGGCAAGCTTGCCACACTAGAGAGTTTCCTTCATCAGGCTGACCTCTTGAGGCAACAAACTATGCAACAGATGCAACGAATTTTGACCACACAACAAGCTGCTCGTGCTCTCCTTGTCATAAATGATTACATTTCAAGGATTCGGGCACTTAATTCATTATGGTTAGCATGCCCTAAAGAGTACTAG 1236 0.449 MDNKIGSVFGAKSSNVAVVASNLQYGTFNTNVGSATTGEVCIETGQQPLFNKGTTLVSGNENWGDSGMAENSQQTEDTSTDIDADDKNQCFSTGSWCNGVRHGALVTVDSKDQSKSKVKAEDQKSLRRLAQNREAARKSRLRKKAYVQQLENSRLRLAQIEEELQRTRQQGVFIATGIAGDHGHSVVGNGVLAFDMDYTRWVDEHQRLINDIRSAMNSQMGDNELQLLVDGVMAHYDELYRLKSIGAKADVFHILSGLWKTPAERCFMWLGGFRPSELLKIVGKHLEPLTDQQLMGIYNLQQSSQQAEDALSQGMEALQQSLSETLSSTSLGPAGSGNVAEYMGQMAIAMGKLATLESFLHQADLLRQQTMQQMQRILTTQQAARALLVINDYISRIRALNSLWLACPKEY 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi26g00052 411 MobiDBLite consensus disorder prediction 60 78 - -
Sebi26g00052 411 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 127 142 IPR004827 GO:0003700|GO:0006355
Sebi26g00052 411 PANTHER TRANSCRIPTION FACTOR TGA9 63 410 - -
Sebi26g00052 411 Pfam bZIP transcription factor 123 153 IPR004827 GO:0003700|GO:0006355
Sebi26g00052 411 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 122 166 IPR004827 GO:0003700|GO:0006355
Sebi26g00052 411 Gene3D - 123 171 - -
Sebi26g00052 411 Coils Coil 143 170 - -
Sebi26g00052 411 Pfam Seed dormancy control 209 282 IPR025422 GO:0006351|GO:0043565
Sebi26g00052 411 ProSiteProfiles DOG1 domain profile. 191 407 IPR025422 GO:0006351|GO:0043565
Sebi26g00052 411 SMART brlzneu 120 173 IPR004827 GO:0003700|GO:0006355
Sebi26g00052 411 MobiDBLite consensus disorder prediction 60 82 - -
Sebi26g00052 411 FunFam BZIP family transcription factor 123 172 - -
Sebi26g00052 411 CDD bZIP_HBP1b-like 124 176 - -
Sebi26g00052 411 SUPERFAMILY Leucine zipper domain 124 168 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi26g00052 Sebi-Chr26 841746 845733 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi26g00052 13 410 bZIP Transcription Factor Family AT1G68640 61.391 7.17e-169 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sebi26g00052 DOG1 2.5e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi26g00052 K14431 - gmx:100775783 615.15